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SCNpilot_cont_1000_p_scaffold_71_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2508..4202)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3V3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 564.0
  • Bit_score: 836
  • Evalue 1.30e-239
  • rbh
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 564.0
  • Bit_score: 836
  • Evalue 4.10e-240
  • rbh
Histidine kinase {ECO:0000313|EMBL:ADU36977.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 564.0
  • Bit_score: 836
  • Evalue 1.80e-239

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
GTGGAAGACCGCGTACTGGTCCTGGCGCCATACGGACGGGATGCGCGGGTCATCAGCGATGTCCTGGCTGCACGGCAAATTCATGCGCACATCTGCAATGACAAGTTCGAACTGCTCCAAGCCCTGGGTCAAGGCTCGGCCGCGACGATATTGACGGAAGAGTCGCTGGTCGACGAAGTGGTGGGTGCGTTGCGCGAAATGCTCATCGCCCAGCCGCCATGGTCCGACTACCCTTTCGTGGTGCTGGCCGCCCGTCTCACGGTGCAACGCTCAGACCGGGCCCGGCAGGCGTTGCAGAGCCTGAGCAACCTGGTGCTTCTGGAGCGGCCCGCCAACGCTGACACCTTGGCCAGCGCCGCGCAATCCGCGTTGCGGGCGCGCCGTCGTCAGTATCTGACACGCGAGCACCTGGTCGAACTGGAGAATTCCAAGCGCCGTGTCGAGCAGGCCAATGACGAACTGGAAGCTCGCATCGTCGAGCGCACGGCGGACCTGGCCAGTGCCAACGACCGTTTGATGCGTGAGATCCTGGAGCGCGAGCGCGTTGAAAATTCGCTCGTCCAGAATCAAAAAATGGAAGCGCTGGGACGATTGACCGGCGGGATCGCCCATGACTTCAACAACCTGTTGCATGTCGTCAACCTGAATCTGCAACTGCTCGAACGGCTGAAAGTGAGCGAGGAACGCGTTCACGTCTACGCGCGCAGGGCCAAAGAGGCTGTCGAACGCGGATCGCGCCTGACGGCCCAGCTCCTGTCCTTCGCGCGCACGCAGAGTCTGGTCCCCAAGCTGCACGATGTGAACGAGTTGATCCGAAACATGGCGGAGCTGATCTCGATCTCCGTGGGATCGCGCATCAGGCTTTCCCTGTCCCTTTCCTCCGAGGCCGCCTTCGTCATCGTCGATGCAGCGCAAATGGAAATGGCCATACTCAACCTGTCGGTCAATGCAAGGGATGCCATGCCCCAAGGAGGCACGCTCGAGATCCGCACCCAGATCGCGGCCTGCAGGACTGCGGGCGCCTCCAGCGAGGCGGCCTACCCTCTCGGGTCCGTCATCGTGTCCATACGCGACACGGGCACGGGGATTCCGGAGAACCTGCTGGACAAGATCTTCGATCCTTTCTTCACGACCAAGCAGCATGAGGGGACCGGTCTGGGATTGAGCCAGGTCTACGGCTTTGCGCGTCAGTCCGGAGGAGACGCCGTAGCGGAAAGCGTGGTGGAGGTGGGGACGACGATCAGGCTGCGCTTTCCACTGGCACCCTCGCCGCAGGAGTCATCCGAAGTACGGCAGGAAACGGTGTCGCCAGCCTCCGCGGCGATACAAGCCGAGATCCTGGTCGTCGAGGACGACCAAGGCGTGCGCCGCAGCATGGTCGAATGCCTTCAGGTGCTCGGCTTTCGCGTCAGACAGGCGTCGGACGGGGCATCCGGCCTGATCGAACTCCAGAAGGCAAAACCGGACCTGCTTCTGGTCGACTACCTCATGCCGCACATGAATGGTGCCGAGCTGATTACCCATGCGCAGGCTATGTACAGCGACATACCTATATTGATGGCGACCGGCTACGCCGACATGAAGGCCGTCGAGCAACTGATCGGACCTCAGTCGGTACTGACCAAGCCTTTCGACCTCGACACACTCGGTGCGGCCGTTTCGCAAGAATTGAAGCGCAAGAACGCTCGAAGATAA
PROTEIN sequence
Length: 565
VEDRVLVLAPYGRDARVISDVLAARQIHAHICNDKFELLQALGQGSAATILTEESLVDEVVGALREMLIAQPPWSDYPFVVLAARLTVQRSDRARQALQSLSNLVLLERPANADTLASAAQSALRARRRQYLTREHLVELENSKRRVEQANDELEARIVERTADLASANDRLMREILERERVENSLVQNQKMEALGRLTGGIAHDFNNLLHVVNLNLQLLERLKVSEERVHVYARRAKEAVERGSRLTAQLLSFARTQSLVPKLHDVNELIRNMAELISISVGSRIRLSLSLSSEAAFVIVDAAQMEMAILNLSVNARDAMPQGGTLEIRTQIAACRTAGASSEAAYPLGSVIVSIRDTGTGIPENLLDKIFDPFFTTKQHEGTGLGLSQVYGFARQSGGDAVAESVVEVGTTIRLRFPLAPSPQESSEVRQETVSPASAAIQAEILVVEDDQGVRRSMVECLQVLGFRVRQASDGASGLIELQKAKPDLLLVDYLMPHMNGAELITHAQAMYSDIPILMATGYADMKAVEQLIGPQSVLTKPFDLDTLGAAVSQELKRKNARR*