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SCNpilot_cont_1000_p_scaffold_650_23

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19096..19773)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J3CSU2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 399
  • Evalue 2.10e-108
  • rbh
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJL77506.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 399
  • Evalue 3.00e-108
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 228.0
  • Bit_score: 392
  • Evalue 8.20e-107
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAAAATCCTGATCGCCGACGACCACCGGCTCGTCATCGAGGCGGTCAAAGCCAAGTTGTCGGAGCTGGAGCCCGGCATCGAGTTCGTGCTGGCGATGAGCGTCGACGAACTGCTTGCGGGCGCCACCGACGACCTCGACCTGGCCCTGATCGACCTCAACATGCCCGGCGCCGACGGCCAGGCGCACATCGACGTGATCCGCCAGCGTCATCCGGCCGTGCCGGTGATGGTGCTGTCGGGTTACGAAGACCCGGCCATCATGCGCAGCGCGCTCGAGCGCGGCGTGCTGGGCTTCATTCCCAAGGCTTATTCACCCGATGTGATGCTCTCGGCCGTGCGGCTGGTGCTGGCCGGCGGCGTGTACGTGCCGCCGATGATGCTCACGGCGCTGCCGCCGGGCATCGTGGCCGGCGTGGTGCCGCAGGCCGCCGAGGCGCTGTCGTCGCGCGGCGGCAGCCAGACGCTGGAGCACCTGCGCAACGTGCTCACCGAGCGGCAGGTCGAGGTGCTGCAGCTGCTGTCGCAGGGCAAGCCCAACAAGCTGATCGGGCGCAGCCTGGGCATCAGCGAAGGCACGGTGAAGATCCATCTGGCCGCGATCTTCCGCGCGCTGAACGTGCGCAACCGCACCGAGGCGGTGGTGGCGGCGCAGGCGCTGACCGAAGCGCAGGCCTGA
PROTEIN sequence
Length: 226
MKILIADDHRLVIEAVKAKLSELEPGIEFVLAMSVDELLAGATDDLDLALIDLNMPGADGQAHIDVIRQRHPAVPVMVLSGYEDPAIMRSALERGVLGFIPKAYSPDVMLSAVRLVLAGGVYVPPMMLTALPPGIVAGVVPQAAEALSSRGGSQTLEHLRNVLTERQVEVLQLLSQGKPNKLIGRSLGISEGTVKIHLAAIFRALNVRNRTEAVVAAQALTEAQA*