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SCNpilot_cont_1000_p_scaffold_581_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 263..2428

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 721.0
  • Bit_score: 1400
  • Evalue 0.0
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 722.0
  • Bit_score: 1383
  • Evalue 0.0
  • rbh
Ribonuclease R n=1 Tax=Variovorax sp. CF313 RepID=J2SYE8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 721.0
  • Bit_score: 1400
  • Evalue 0.0
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2166
ATGCGCGCGGTGCTGCACAAGGACCGCGTCAAGGCGCGTGTGGTGCGGCAAGACCGGCGCGGCCGCCCCGAGGGGCGCGTGGTCGAAATCGTCGAGCGCTCAGAGCAGCCGATCATCGGCCGCCTGCTGCATGAAGGTGGAATCTGGCTCGTTGCTCCGGAAGACAAGCGCTACGGTCAGGACGTACTGATCCCCAAGGGCGCGACCGGTCCCGCGAAGGTGGGGCAGGTTGTCGTCGTGCAACTCACGGAGCCGCCGGCGCTGTTCGGCCAGCCCGTGGGTCGCGTGAAAGAGGTGCTGGGCGAGATCGACGACCCCGGCATGGAAATCGAAATCGCCGTGCGCAAGTACGGCGTGCCGCACGAGTTTTCCGCGGAGTGCCTGGCTGAAGCCAAGGCGCTGCCCGAGAAGGTCCGTCCCGCAGACAAGAAGGGGCGTGTCGACCTCACCGACATCCCCCTCGTCACCATCGACGGCGAAGACGCACGCGACTTCGACGATGCCGTCTACTGCGAGCCTGCAAAAGTGGGCCGTGGCAAGGGCTGGCGCCTGCTGGTCGCCATCGCCGACGTCAGCGCCTATGTGCAGACCGGTTCGGGTATCGACATCGACGCCTACGACCGCGCCACCAGCGTCTACTTTCCGCGCCGCGTCATCCCGATGCTGCCGGAGAAGCTGTCGAACGGCCTGTGCTCGCTGAACCCGGAGGTCGAGCGCCTGTGCATGGTGTGCGACATGCTGGTCGCGGCCGACGGCGAAATCTACGCCTACCAGTTCTATCCGGCCGTGATGTTCAGCCATGCGCGATTCACGTACACCGAAGTCGCGGCCATCCTTGGCAACACGCGTGGCCCCGAAGCCGCCAAGCGCAAGGATCGCGTCAAGGACCTGCTGAACCTCGCCGACGTCTACAAGGCGCTGCTCAAGCAGCGCGGCAAGCGCGGCGCGGTCGACTTCGAAACCACCGAGACGCAGATCATCTGCGACGACGCCGGTCGCATCGAGAAAATCGTGCCGCGCACGCGCAACGAGGCGCACCGCCTGATCGAAGAAGCCATGCTCGCGGCTAACGTCTGCAGCGCCGACTTCATCGCCGAAGGCAAGCACCCAGGCCTGTTCCGCGTGCACGAAGGCCCGACGCCCGAGAAGAAGGAAATCCTGCGGGGCTATCTGAAGGCGATGGGCGTGGGCCTGAGCATCACCGACGACCCCAAGCCGGGCGAGTTTCAGGCGATTGCCGAGGCCACCAAGGAGCGCCCCGACGCGCAGCAGATCCACACCATGCTGCTGCGTTCGATGCAGCAGGCGATCTACACGCCGATCAACAGCGGCCACTTCGGGCTGGCTTACGAGGCCTACACGCACTTCACGAGCCCGATCCGGCGTTATCCGGACCTGCTGGTGCACCGCGTGATCAAGGCCATCCTGGGCAAGACGCGCTACCAGCTGCCGATGCTGCCGACGCCGGGCGAGGCGCATGCCAAGCTGGCGAAGCGGCTCGCGTCGCGCGTGAAGGCGCCGACCAACAAGCCGCAGAAGGCGACCGTCGCTCCCAGCAAGGAAGTGCTGGCATGGGAAGCCGCGGGCCTGCATTGCAGTGCCAACGAACGCCGCGCCGATGAAGCCAGCCGCGACGTCGAGGCCTGGCTCAAGTGCAAGTACATGCGCGAGCACCTCGGCGAGGAGTACGGCGGCGTGGTCACTGCGGCCACGACATTCGGCATCTTCGTCACGCTCGACGCGATGTACGTCGAAGGGCTGGTGCACATCACCGAACTCGGCGGCGAGTACTTCAAGTTCGACGAGATGCGCCAGGAACTGCGCGGCGAGCGCACCGGCATCCGCTACGCCATCGGCACGCGGGTGCGGGTGCAGGTGAGCCGCGTCGACCTGGACGGCCGCAAGATCGACTTCCGCCTCGTGCGCGAAGGCGAGGAGCTCATGGCGCGCGCCATGAAGGACAAGGGCGCGGCATCATCCGGCGTGCCGGTCAAGGCATCGGCCAAGCGCGGCACGCGCCACAAGGCGGCGGAAGCCGGCGGCGGCGAGCCGCGCGGAGAGCGAGGCACCTCGGCCTCCGCGGGGCCGCAATCGGCGATGCAGGCTTTCAAGTCGGCGGTCAAGAAGGCCGCCAACAAGATGAAGGGGCGCAAGCCGCGCCGCTGA
PROTEIN sequence
Length: 722
MRAVLHKDRVKARVVRQDRRGRPEGRVVEIVERSEQPIIGRLLHEGGIWLVAPEDKRYGQDVLIPKGATGPAKVGQVVVVQLTEPPALFGQPVGRVKEVLGEIDDPGMEIEIAVRKYGVPHEFSAECLAEAKALPEKVRPADKKGRVDLTDIPLVTIDGEDARDFDDAVYCEPAKVGRGKGWRLLVAIADVSAYVQTGSGIDIDAYDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVERLCMVCDMLVAADGEIYAYQFYPAVMFSHARFTYTEVAAILGNTRGPEAAKRKDRVKDLLNLADVYKALLKQRGKRGAVDFETTETQIICDDAGRIEKIVPRTRNEAHRLIEEAMLAANVCSADFIAEGKHPGLFRVHEGPTPEKKEILRGYLKAMGVGLSITDDPKPGEFQAIAEATKERPDAQQIHTMLLRSMQQAIYTPINSGHFGLAYEAYTHFTSPIRRYPDLLVHRVIKAILGKTRYQLPMLPTPGEAHAKLAKRLASRVKAPTNKPQKATVAPSKEVLAWEAAGLHCSANERRADEASRDVEAWLKCKYMREHLGEEYGGVVTAATTFGIFVTLDAMYVEGLVHITELGGEYFKFDEMRQELRGERTGIRYAIGTRVRVQVSRVDLDGRKIDFRLVREGEELMARAMKDKGAASSGVPVKASAKRGTRHKAAEAGGGEPRGERGTSASAGPQSAMQAFKSAVKKAANKMKGRKPRR*