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SCNpilot_cont_1000_p_scaffold_581_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11187..11915

Top 3 Functional Annotations

Value Algorithm Source
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 235.0
  • Bit_score: 455
  • Evalue 6.40e-125
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 235.0
  • Bit_score: 424
  • Evalue 2.10e-116
  • rbh
Isoprenyl transferase n=1 Tax=Variovorax sp. CF313 RepID=J2SYE2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 235.0
  • Bit_score: 455
  • Evalue 4.60e-125
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCCTCGTCAACGCCGCGCGTTCCGCATCACGTTGCCATCGTCATGGACGGCAACGGCCGTTGGGCGACGCGGCGTTTCCTGCCCCGCGTCGCGGGGCACAAGCAGGGCGTCGAATCGCTGCGCCGCTGCGTCAAGGCCTGCGCCGACCGCGGCGTAGGCGTGCTCACGGTGTTCGCGTTTTCGTCCGAGAACTGGAATCGGCCCGTCGAGGAAGTTTCCGGACTCATGGAGTTGATGGTCGGTGCGCTCGCCCGCGAAGTGCCCCGACTCAGCAGCGACGGCGTGCGACTGTACTTCGTCGGCGAACGCGGCGGCCTGTCGCCGAAGATGGTGAAGGGGCTGGTCGACGCCGAAGCGGCGACCGCGCACAACGAGCGCATGGTGCTCAACGTCTGCTTCAACTACGGCGGCCGGTGGGACGTTGCGCAGGCAGCTGCAAAGCTGGTGGCGCGAGGCGAAGCGGTTACCGAGGCGAGCCTCGACCGGGCGATGTCGTTGGCCCACGTGCCCGATCCCGATCTGTTCATCCGCACGGGCGGCGAGCAGCGGTTGTCCAATTTCCTGCTCTGGCAAAGTGCCTACGCAGAGCTTTTCTTCAGCGACAAGCTGTGGCCGGAATTCGACGAGGCTGCGCTGGACGAGGCCATCGCCGCGTTCCAGGGCCGCGAGCGGCGCTTCGGTCAAACCTCGGCACAGGTCTCGCCCCCCCAGGGGCAGGCGGCCTGA
PROTEIN sequence
Length: 243
MASSTPRVPHHVAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENWNRPVEEVSGLMELMVGALAREVPRLSSDGVRLYFVGERGGLSPKMVKGLVDAEAATAHNERMVLNVCFNYGGRWDVAQAAAKLVARGEAVTEASLDRAMSLAHVPDPDLFIRTGGEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQVSPPQGQAA*