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SCNpilot_cont_1000_p_scaffold_570_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7931..8449)

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Variovorax paradoxus RepID=UPI000361FBAC similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 151.0
  • Bit_score: 252
  • Evalue 2.50e-64
UspA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 3.10e-29
UspA domain protein {ECO:0000313|EMBL:ACS19449.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 1.40e-28

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCGCAAAGAGCGGGCTGGCATCGCGGTCATGGATGCAGCCTGGCCCGGCAAGGAGCAATCCGTGTATCGACGAATACTCGTTCCCGTAGACGGCAGCCCGGCATCGGCCCAGGGCATCGAGGAGGCGATTCGCCTCGCCAAACCGATGAGAAGCCGGGTGCGGCTGCTTCACGCGATCGACGATCTCTCGGTTTCGCGCGCCGGCTACGCGCGTGACGGGTCGTCGCAACTTCGGGCGGAGGCCGCGCGCATGCTCGCCCGAAGTGCCGAGCACGTGCGTTCCGCGGGCGTGGAGGTCGACACCGTGCTCTACAGCGAAGCGGACGGCACCGTGGCCAACCTCGTCGAAGACGAGGCGCGGGAATGGCATGCCGACCTGATCATTGCCGGCACGCGAGGCCGGCGCGGCCTCGGACAGCTGCTGCTCGGCAGCAGCACGGAGCGGATCGTGCGCGGCTCATGCGTTCCCGTGCTGCTGGTGCATGCGACGGCGGACGAGCAGGCGGCCGTCGGGTAG
PROTEIN sequence
Length: 173
MRKERAGIAVMDAAWPGKEQSVYRRILVPVDGSPASAQGIEEAIRLAKPMRSRVRLLHAIDDLSVSRAGYARDGSSQLRAEAARMLARSAEHVRSAGVEVDTVLYSEADGTVANLVEDEAREWHADLIIAGTRGRRGLGQLLLGSSTERIVRGSCVPVLLVHATADEQAAVG*