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SCNpilot_cont_1000_p_scaffold_628_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 88..654

Top 3 Functional Annotations

Value Algorithm Source
Phosphonate degradation operons associated HDIG domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5Q2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 180.0
  • Bit_score: 326
  • Evalue 1.50e-86
  • rbh
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17729.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 186.0
  • Bit_score: 345
  • Evalue 4.30e-92
phosphonate degradation operons associated hdig domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 180.0
  • Bit_score: 326
  • Evalue 4.60e-87
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGCCTGAGCATTCCCGACATCGTCGGCCTCTTCGAAACCAAGGGCGGTGCGCAGTACGACGGCGAGCCGGTCACCCAACTGGAGCATGCGCTGCAGTCGGCGCACCTGGCGGAGCAGGAGGGCGCCAGCAGCGAGCTGATCGCCGCCTCGCTGCTGCACGACCTGGGCCATCTGCTGCACGACTTCGGCGGCACGCCGACGCAGCAGGGCCTGGACGACCTGCACCAGTACCGCTGCCTGCCGTTTCTTCGCGCGCTGTTCGGCCCGGCCACGCTGGAGCCGATCCGCCTGCATGTGGATGCCAAGCGTTTCCTCTGTGCCAGGGAGCCCGGTTATCTCGAAGCGCTGTCGCCCGATTCGAAACGCAGCCTGCACCTGCAGGGCGGCGTGTTCGACTCGGCGCAGGCCAGCGCGTTCGAGGCCTTGCCCTATGCGATGGATGCGGTGCGCCTTCGGCGCTGGGACGACACGGCCAAGTGCGCCGATGCGAAGACGCCCGACCTGGCGTACTACGCGCGCCACCTAGCGATCGCGTCGAAGACGGCTGCCGCGGCACCGGCATGA
PROTEIN sequence
Length: 189
MSLSIPDIVGLFETKGGAQYDGEPVTQLEHALQSAHLAEQEGASSELIAASLLHDLGHLLHDFGGTPTQQGLDDLHQYRCLPFLRALFGPATLEPIRLHVDAKRFLCAREPGYLEALSPDSKRSLHLQGGVFDSAQASAFEALPYAMDAVRLRRWDDTAKCADAKTPDLAYYARHLAIASKTAAAAPA*