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SCNpilot_cont_1000_p_scaffold_628_7

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5006..6148)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Fis family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5R7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 377.0
  • Bit_score: 641
  • Evalue 4.10e-181
  • rbh
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 377.0
  • Bit_score: 641
  • Evalue 1.30e-181
  • rbh
Transcriptional regulator, Fis family {ECO:0000313|EMBL:ADU35964.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 377.0
  • Bit_score: 641
  • Evalue 5.80e-181

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGCCTGTCGCCTCAACCGCTTCGCCAGCGCCCGAGCGCTCCCTGGCCATCGCCCAGGCCCGCCGCGAACTGATCCACGGCGAATCCCCGCGAACGCGCACGACGGCCTGCATCGACTCATGGATCAGCCGCTCCTGGCAGCGCTGCATCGAGGCCGGCCGGCGCCCGCAGCAGAGAGTGAGTTTCGACCCGGTGAGCCAGTCGGCGGGCCTGGATGTCGCGGAGCGCAACCGGGTGCTGGTCGAGGCCGCGCGGCCGGTGATCGAGCGGCTCTCGCGCGCGATTGCCGACACCCGCTATTTCGCGATCCTGACCGACGCCGACGGCATCGTGGTCGACGTCGGCAACCTGCCCGACGGCACCGACGCCGCCAGCCGCTATGCGCGCGACATCGGGCGCGTCGGGGTCGACCTGTCGGAGTCGGCCATCGGCACCAGCGCCATCGGCACCGCGCTGGCCGAGCATGAATCGGTATGGCTGCACCGCGGCGAGCATTTCTTCGACGACACCAGCGTCTACAGCTGCGCCGGCGCGCCGCTGTTCGGTCCCCGAGGCGACTGCATCGGCATGCTCGACCTGACCGGCGTGCAGGTGGTGGAGCGGCCGGAGCTGCGGCACCTGGCCACCCTGTCGGCGCGCAGCATCGAGAACATGCTGGTGCTGCGCGAGCCCTGCGAACTGCTGCTGCGCCTGGCCTGGCCCGGCAGCACCGCGAGCGAAGCCACCGAGGGGCTGCTGTGCATCGACGGCGAAGGCTATGTCACCGGCGCCAACGCGGCGGCCCGGCAGATGCTGCACCAGCCGCTGGCGCGCAACGAGCACGCGCTGCATTTCAACGACCTGTTCGCCCTGCCCCTGCACATGATGTTCGACGCCGCCCGGCGCGGCGACGCCATGCTCGAGGTGCCGCTGTGGTCCGGCCTGCGGGTGCAGGTGCAGCCCCAGCGCGGCGGGCGCGGCACGCCAGGGCTGCCGGCGGCGGACGTCCGGCCCCGGCTGCGCGACGTGGAAACCGCGCTGATCCGCAAGGCCGTGGCCGACGCCCGCGGCAATGTCGCGGAGGCCGCGCGGGCGCTGGGCATCAGCCGGGCGACCGTGTATCGCAAGCTGTGGCGCGGCCGGCCGGCCGGCGCGCCGGATTGA
PROTEIN sequence
Length: 381
MPVASTASPAPERSLAIAQARRELIHGESPRTRTTACIDSWISRSWQRCIEAGRRPQQRVSFDPVSQSAGLDVAERNRVLVEAARPVIERLSRAIADTRYFAILTDADGIVVDVGNLPDGTDAASRYARDIGRVGVDLSESAIGTSAIGTALAEHESVWLHRGEHFFDDTSVYSCAGAPLFGPRGDCIGMLDLTGVQVVERPELRHLATLSARSIENMLVLREPCELLLRLAWPGSTASEATEGLLCIDGEGYVTGANAAARQMLHQPLARNEHALHFNDLFALPLHMMFDAARRGDAMLEVPLWSGLRVQVQPQRGGRGTPGLPAADVRPRLRDVETALIRKAVADARGNVAEAARALGISRATVYRKLWRGRPAGAPD*