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SCNpilot_cont_1000_p_scaffold_1067_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7941..8927)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036BC64D similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 328.0
  • Bit_score: 600
  • Evalue 1.20e-168
  • rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35781.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 328.0
  • Bit_score: 592
  • Evalue 3.50e-166
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 328.0
  • Bit_score: 565
  • Evalue 1.00e-158
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCAGCGCAGATACTTCGGCGCTAGCGTTGCTGCGATGGCCGTCGCGCTGATGGGCGGCGCGGGCCTGGCCCATGCCGCCGCGTGGCCCGACAAGCCGGTTAAGCTGGTGGTGCCCTTCCCGCCGGGGCAGGCCACCGACATCTTCGCCCGCGCGGTGGCCGAGCAACTCGGCAGGCGGCTGGGCCAGCCGGTGATCATCGACAACAAGGCCGGCGCCGGCAGCAACATCGGCACCGAGTTCGTGGTGCGCTCGCAGCCTGACGGCTACACGCTGGTGGTGGCGGGCAGCGCGATGGCGGTGAACCAGACGCTCTACGCCAAGCCGAGCTTCGATCCGCGCAAGGACCTGGTCGGCATCTCGCTCATCGCGAAGGTGCCGCTGGTGTTCCTGGCCACGCCCGAAAGCGGCATCCGCACGCTGGCCGATCTCACCGCGCGCGCCAAGGCCGAGCCCGGCCGGCTGAGCTATGCGAGCGCCGGCATCGGCGGCACGCAGCATCTGTCGGGCGAGATGTACAAGTCGGCGGCGCATGTGTTCATCACGCACATTCCGTACCGCGGCAGCGGCCCGGCGCAGTCGGACTTCCTGGGCAACCAGGTGCCGCTGATGATCGACTCGGTGACGGCCGCGCTGCCGCACATCAAGTCGGGCAAGGCGGTGGCGCTGGCCGTCACGTCGGCCACGCGCTCGTCGCAGCTGCCCGACGTACCCACGGTGGCCGAAAGCGGCGTGGCCGGCACGAAGAACTTCGAGGCCGTGGGCTGGCTCGGCCTGATGGCGCCGCGCGGCACGCCGCCGGAGATCGTCGAGCGCCTCAACCATGAGGTGACCGACATCCTCAAGAGCGAGCAGATGGCGCGCTTCATCCGCGAGCGCGGCTCCGAGCCGGCGCCCACCACGCCGGCGGAGTTCGACCGCTTCGTGGCAAGCGAGATCCGCCTGTGGGGCGCGGCGGTGAAGGCCTCGGGCGCCAAGCCCGAGTAA
PROTEIN sequence
Length: 329
MQRRYFGASVAAMAVALMGGAGLAHAAAWPDKPVKLVVPFPPGQATDIFARAVAEQLGRRLGQPVIIDNKAGAGSNIGTEFVVRSQPDGYTLVVAGSAMAVNQTLYAKPSFDPRKDLVGISLIAKVPLVFLATPESGIRTLADLTARAKAEPGRLSYASAGIGGTQHLSGEMYKSAAHVFITHIPYRGSGPAQSDFLGNQVPLMIDSVTAALPHIKSGKAVALAVTSATRSSQLPDVPTVAESGVAGTKNFEAVGWLGLMAPRGTPPEIVERLNHEVTDILKSEQMARFIRERGSEPAPTTPAEFDRFVASEIRLWGAAVKASGAKPE*