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SCNpilot_cont_1000_p_scaffold_1067_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8931..11894)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 986.0
  • Bit_score: 1923
  • Evalue 0.0
DNA topoisomerase iii; K03169 DNA topoisomerase III [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 987.0
  • Bit_score: 1914
  • Evalue 0.0
  • rbh
DNA topoisomerase III n=1 Tax=Variovorax sp. CF313 RepID=J2KHL1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 986.0
  • Bit_score: 1923
  • Evalue 0.0
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2964
ATGACAAAGACGTTGGTAATCGCAGAAAAGCCGTCGGTGGCACAGGACATCGTCCGTGCCCTCACGCCGGTGGCCGGCAAATTCGACAAACATGACGAGCATTTCGAGAACGACAGCTATGTCGTGACCAGCGCGGTCGGTCACCTGGTCGAAATCCAGGCGCCCGAGGAATTCGACGTCAAGCGGGGCAAGTGGAGCTTCGCCAACCTGCCGGTGATTCCACCGCACTTCGACTTGAAGCCGGTCGACAAGACCAAGACGCGCCTGAACGCGGTGGTCAAGCAGGCCAAGCGCAAGGACGTGACGCAGCTCATCAACGCCTGCGACGCGGGCCGCGAGGGCGAGCTGATCTTCCGCCTGATCGAGCAGTACGCCGGCGGCAAGTCGGGCCTGAACAAGCCGGTCAAGCGGCTGTGGCTGCAATCGATGACGCCGCAGGCCATCCGCGACGGCTTCGACGCGCTGCGCACCGAAAAGCAGATGCAGGGCCTGGCCGACGCCGCGCGCTCGCGCTCCGAAGCCGACTGGCTGGTGGGCATCAACGGCACGCGCGCCATGACGGCATTCAATTCGCGCGACGGCGGCTTCTTCCTCACGACCGTGGGCCGCGTGCAGACGCCGACGCTCTCGGTGGTGGTGGAGCGCGAGGAACAGATCCGCAAGTTCGTCTCGCGCGACTACTGGGAAATCCACGGCACCTTCGCGGCCGAGGCCGGCGAGTACCCGGGCAAGTGGTTCAACCCCGACTGGAAGAAGGCCAACGCGCCGCTCTTGGCCAACGGCGAGCCCGACCCCGAGCAGCGTGCCGATCGCGTGTGGAATGAGCAGGAAGCCCGCGCCATCGCCGATGCCGCGCGCGGCAAGCCCGCCACCGTCACCGAAGAGAGCAAGCCCACCACGCAGGCTTCGCCGATGCTGTTCGACCTGACTTCGCTGCAGCGCGAAGCCAACGGCCGCTTCGGCTTCAGCGCCAAGACCACGCTCGCGCTGGCGCAGAGCCTGTACGAGCGCCACAAGGCGCTGACTTACCCGCGTACCGATTCGCGCGCGCTGCCGGAAGACTATCTGCCGGTGGTCAAGGACACCATGGGCATGCTCGCCAACAGCGGCATGAAGCACCTGGCCCCGTTCGCCAAGCAGGCGGTCGACGGCAACTACGTCCGGCCCAACAAGCGCATCTTCGACAACGCCAAGGTGTCGGATCACTTTGCCATCATCCCGACGCTGCAGGCCCCCAGCGGCCTGAGCGAGGCCGAGCAGAAGCTGTACGACTTCGTGGTGCGCCGCTTCCTGTCGGTGTTCTTCCCGAGCGCCGAATACCAGGTGACCACGCGCATCAGCACGGTGGAGCAGGGCGGCAAGAAGTACCCCTTCCGCACCGACGGCAAGGTGCTGGTGAAGCCGGGCTGGCTCGCCATCTACGGCAAGGAAGCCCAGGACGACGAGAAGGAAGACGACAAGGACGGCAAGCGCCTCGTGCCGGTGAAGCCGGGCGAGATCGTGAAGACCGAATCGGCCGACACCAAGGGCCTGAAGACGCGCCCGCCGGCGCGCTACTCCGAAGCCACGCTGCTGGGCGCGATGGAAGGCGCGGGCAAGACCATCGACGACGACGAGCTGCGCGAAGCCATGCAGGAAAAGGGCCTGGGTACGCCAGCCACGCGCGCGGCCACCATCGAAGGCCTGATCACCGAAAAATACATGCTGCGCGAGGGCCGCGAGCTGATTCCCACGGCCAAGGCCTTCCAGCTCATGACGCTGCTGCGCGGCCTGGGCGTGGAAGAACTCTCCAAGGCCGAGCTCACCGGCGAGTGGGAATACAAGCTCGCGCAGATGGAGAAGGGCGCGCTCAGCCGCGACGCCTTCATGCGCGAGATCGCCCAGATGACGGAGCACATCGTCAAGAAGGCGAAGGAATACGACCGCGACACCGTGCCGGGCGACTACGCCACCCTGCAGACGCCGTGCCCCAACTGCGGCGGCATCGTGCGCGAGAACTACCGCCGCTACGCCTGCACCGGCAAGAGCGGCACCGGCGAGGACGCCTGCGGCTTCTCGTTCGGCAAGTCGCCGGCCGGGCGCACCTTCGAGGTGGCCGAGGCCGAGGCGCTGCTGCGCGACAAGCACATCGGCCCGCTGGAGGGCTTCCGCTCCAAGGCCGGCTGGCCCTTCACCTCCGAGATCGTCATCAAGTTCGACGACGAGGCGAAGAACTGGAAGCTGGAGTTCGACTTCGGCGACGACAAGAACGCCGACACCGGCGAGATCGTCGACTTCAGCGAGCAGGACACCGTGGGCCCGTGCCCGGTGTGCGGCGCGCCGGTGTTCGAGCACGGCAGCAACTACGTCTGCGAGAAGTCGGTTCCGACCAATGCGCAGCCCACGCCCACCTGCACCTTCAAGACCGGCAAGATCATCCTGCAGCAGCCGGTGGAGCGCGCGCAGATGGAAAAGCTGCTGGCCACCGGCAAGACCGACCTGCTCGACAAGTTCGTGAGCATGCGCACGCGCCGCGCCTTCAAGGCCTTCCTGACCTGGAACGCCGAAGAAGGCAAGGTGACCTTCGAATTTGCACCGCGCGAAGGCGGTAGCAAGTTCCCGCCGCGCAAGACCTTCGGCAAGGCCGCGCCCGCCGGCAAGACGGCCGCGGCCAAGAAGGTGGCGGCGAAGAAGACGCCCGCCGCCAAGAAGGCCCCGGCAGCCAAGAAGGCCGCCGCGCCGCGCAAGCCCGGCGCGGGCCTGAAGCCCAGCGACTCGCTGGCCGCGGTGATCGGCGCCGAACCGGTGGCGCGCACCGAGGTCATCAAGAAGCTGTGGGACTACATCAAGGCCAACGGCCTGCAGGATGCGACCAACAAGCGCGCGATCAATGCCGACGCCAAGCTTAAGCCGGTGTTCGGCAAGGACCAGGTGACGATGTTCGAACTCGCGGGCATCGTGGGCAAGCACCTCTCGGCGACCTGA
PROTEIN sequence
Length: 988
MTKTLVIAEKPSVAQDIVRALTPVAGKFDKHDEHFENDSYVVTSAVGHLVEIQAPEEFDVKRGKWSFANLPVIPPHFDLKPVDKTKTRLNAVVKQAKRKDVTQLINACDAGREGELIFRLIEQYAGGKSGLNKPVKRLWLQSMTPQAIRDGFDALRTEKQMQGLADAARSRSEADWLVGINGTRAMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEQIRKFVSRDYWEIHGTFAAEAGEYPGKWFNPDWKKANAPLLANGEPDPEQRADRVWNEQEARAIADAARGKPATVTEESKPTTQASPMLFDLTSLQREANGRFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPVVKDTMGMLANSGMKHLAPFAKQAVDGNYVRPNKRIFDNAKVSDHFAIIPTLQAPSGLSEAEQKLYDFVVRRFLSVFFPSAEYQVTTRISTVEQGGKKYPFRTDGKVLVKPGWLAIYGKEAQDDEKEDDKDGKRLVPVKPGEIVKTESADTKGLKTRPPARYSEATLLGAMEGAGKTIDDDELREAMQEKGLGTPATRAATIEGLITEKYMLREGRELIPTAKAFQLMTLLRGLGVEELSKAELTGEWEYKLAQMEKGALSRDAFMREIAQMTEHIVKKAKEYDRDTVPGDYATLQTPCPNCGGIVRENYRRYACTGKSGTGEDACGFSFGKSPAGRTFEVAEAEALLRDKHIGPLEGFRSKAGWPFTSEIVIKFDDEAKNWKLEFDFGDDKNADTGEIVDFSEQDTVGPCPVCGAPVFEHGSNYVCEKSVPTNAQPTPTCTFKTGKIILQQPVERAQMEKLLATGKTDLLDKFVSMRTRRAFKAFLTWNAEEGKVTFEFAPREGGSKFPPRKTFGKAAPAGKTAAAKKVAAKKTPAAKKAPAAKKAAAPRKPGAGLKPSDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDATNKRAINADAKLKPVFGKDQVTMFELAGIVGKHLSAT*