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SCNpilot_cont_1000_p_scaffold_1067_15

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13729..15171)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 479.0
  • Bit_score: 897
  • Evalue 9.70e-258
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 477.0
  • Bit_score: 873
  • Evalue 4.40e-251
  • rbh
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J3CW42_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 479.0
  • Bit_score: 897
  • Evalue 6.90e-258
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
GTGAAGCTGTTTCAGCGCGCGCAGCGCTCGCTGTTCGGCGAGATCCTCGACTGGATGCTCACGCCGCTGCTGCTGCTGGTGCCGGTGAGCATCGGCGTCACCTGGCTGGTGGCGCAGGGCATCGCCAACGCGCCCTTCGACCGTGCGCTCGAGCACAACGTGAAGGCGCTGTCCGAGCTGGTGACGGTGAAGGACGGGCATACGCAGTTCGTGCTCTCGCAGTCGGCGCGCGAGATCCTGCGGGCCGACGATGCCGGCCACGTCTACTACCAGCTGCTCGACGGCCACGGCACGCTGCTGAGCGGCGAACGCGACATTCCCCAGCCCGGCCTCGACGAGCCGCTGCCGCCCAACCAGGTGTTCCTGCACAACAGCGACGTGCACGGCCTGCCGGTGCGCGTGGCCTCGATGTGGCTGGCCAGCGGCAGCGACGACGTGCCGCCCTCGCTGCTGCAGCTGGCCGAGACGCGCGAGAAGCAGTCGGTGCTGGCCGCCGAGATCATCAAGGGCGTGCTGCTGCCGCAGTTCGCGATCCTGCCGCTGGCGGTGCTGCTGATCTGGCTGGCGCTGGTGCGCGGCATCAAGCCGCTGTCGGTGGTGGAGGCGCGCATCCGCGAACGGCGCCCCGGCGACCTGAGCCCGCTGGACGAATCGTCGGTGCCGCTCGAAGTGGTGCCGCTGGTGTCTTCGGTGAACGAGCTGCTGGACAAGCTCAACGATTCGATCGGCACGCAGAAGCGCTTCCTGGCCGACGCGGCGCACCAGCTGAAGACGCCGCTCGCCGGCCTGCGCATGCAGGCCGACCTGGCGCAGCGCGAAGGCGCCAACGCCGACGAGCTGAAGCAGTCGCTCAAGCAGATCGGCCGCGCCAGCAAGCGCGCCACGCACACGGTGAACCAACTGCTGTCGCTGGCGCGCGCCGAGGGCAACAGCGCCAACGTGCACCACCAGCCCTGCGACCTGGCGCGGCTCACCATCGAGGTGGTGCGCGAGGCGGTGCCGCGCGCCATCGAGAAGCGCATCGACCTCGGCTACGACGGCGCCGAGGCCGGCGCGCCGGGCGTGATGTTCGACGGCAACCAGACGCTGCTGAAGGAGCTGGTGCGCAACCTCGTCGACAACGCGCTGAACTACACGCCCTCGACGCCCGAGCGCCCCGGCCTGATCACCGTGCGCGTGCTGGCCGACCCCTTCGGCCATGTGCTGCTGCTGCAGGTGGAGGACAACGGCCCCGGCATCGCCGAAGCCGACCGCGAGCTGGTGTTCGAGCCGTTCTACCGCGTGCTCGGCAACGAGGCCGACGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGAGATCGCGAACCAGCATCGCGCGCTGGTGAAGCTGGAGGATGCGCATCCCGGCAAGCATCCGCCGGGGGCGCTTTTCACGGTGCGCTTCGAAGCCGAGGCGCCTGTCTGA
PROTEIN sequence
Length: 481
VKLFQRAQRSLFGEILDWMLTPLLLLVPVSIGVTWLVAQGIANAPFDRALEHNVKALSELVTVKDGHTQFVLSQSAREILRADDAGHVYYQLLDGHGTLLSGERDIPQPGLDEPLPPNQVFLHNSDVHGLPVRVASMWLASGSDDVPPSLLQLAETREKQSVLAAEIIKGVLLPQFAILPLAVLLIWLALVRGIKPLSVVEARIRERRPGDLSPLDESSVPLEVVPLVSSVNELLDKLNDSIGTQKRFLADAAHQLKTPLAGLRMQADLAQREGANADELKQSLKQIGRASKRATHTVNQLLSLARAEGNSANVHHQPCDLARLTIEVVREAVPRAIEKRIDLGYDGAEAGAPGVMFDGNQTLLKELVRNLVDNALNYTPSTPERPGLITVRVLADPFGHVLLLQVEDNGPGIAEADRELVFEPFYRVLGNEADGSGLGLPIVREIANQHRALVKLEDAHPGKHPPGALFTVRFEAEAPV*