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SCNpilot_cont_1000_p_scaffold_1067_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(15209..15883)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J2KHL5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 223.0
  • Bit_score: 425
  • Evalue 2.80e-116
  • rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJL79690.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 223.0
  • Bit_score: 425
  • Evalue 3.90e-116
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 222.0
  • Bit_score: 422
  • Evalue 9.60e-116
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAGAATTCTGATTGCCGAAGACGACCAGGTGCTGGCCGATGCCCTGCTGCGCAGCCTGCGCACCTCGGGCGCGGCGGTCGACCACGTGGCGAACGGCTCGCAGGCCGACACCGCGCTCATGACCCATGACGAATTCGACCTGCTGATCCTCGACCTCGGGCTGCCCAGCCTGCACGGCATCGAGATCCTCAAACGCCTGCGCGCGCGCGGCTCGCAACTGCCGGTGCTGGTGCTCACGGCGGCCGACAGCGTGGAAGAACGCGTCAAGGGCCTGGACAACGGGGCCGACGACTACATGGCCAAGCCCTTCAGCCTGCAGGAGCTGGAGGCCCGCGTGCGCGCCCTCACGCGGCGCGGCATGGGCACCACCAGCAACGCGATCCGCCACGGTCCGCTGGTCTACGACCAGGCCGGCCGCGTGGCCACCATCGACGGCAAGATGATCGAGCTTTCGGCACGCGAACTCGGCCTGCTCGAAGTGCTGCTGCAGCGCGCCGGCCGGCTGGTGAGCAAGGACCAGCTGGTCGACCGCCTCTGCGAATGGGGCGAGGAGGTGAGCCTGAACGCCATCGAGGTGTACATCCACCGGCTGCGCAAGAAGATCGAGAAGGGTCCGGTGCGCATCGCCACGGTGCGCGGGCTGGGCTATTGCCTCGAGAAGATCCAGAACTGA
PROTEIN sequence
Length: 225
MRILIAEDDQVLADALLRSLRTSGAAVDHVANGSQADTALMTHDEFDLLILDLGLPSLHGIEILKRLRARGSQLPVLVLTAADSVEERVKGLDNGADDYMAKPFSLQELEARVRALTRRGMGTTSNAIRHGPLVYDQAGRVATIDGKMIELSARELGLLEVLLQRAGRLVSKDQLVDRLCEWGEEVSLNAIEVYIHRLRKKIEKGPVRIATVRGLGYCLEKIQN*