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SCNpilot_cont_1000_p_scaffold_1067_18

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16581..17687

Top 3 Functional Annotations

Value Algorithm Source
Protein RecA n=1 Tax=Variovorax sp. CF313 RepID=J2TM82_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 704
  • Evalue 6.60e-200
  • rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 704
  • Evalue 9.20e-200
reca protein; K03553 recombination protein RecA similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 367.0
  • Bit_score: 688
  • Evalue 1.20e-195
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGGACGCAGTCGTCAAGGGCGCAAGCATCTCGGTCGCCAACAGTGAAAAAGCCAAGGCCCTGCAGGCCGCGCTGGCCCAGATCGAAAAGCAGTTCGGCAAGGGCACGATCATGCGGCTCGGCGAAGGCGAGGCGCTGGAAGACATCCAGGTGGTCTCGACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGTGGCCTGCCGCGCGGCCGCGTCATCGAAATCTACGGCCCTGAATCCTCGGGCAAGACCACGCTCACGCTGCAGGTCATTGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGCCGAACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTCAACCTGTCCGACCTGCTGATCAGCCAGCCCGACACCGGAGAGCAGGCCCTGGAAATCGTCGATTCGCTGGTGCGTTCGGGCGCGGTGGACCTGATCGTGGTCGACTCGGTCGCAGCGCTCACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTTCGCCCGAAACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGCACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAAGGCATCAGCCGCGAAGGCGAGATCATCGACATGGGCGTGACCGCCAAGATCGTCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTCCTGCGCGAGAACCCCGAGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCATTCCGCTGCTGGCCGCCGACGCCGGCGCCACGCCCGAAAAGCCGCAGAAGGCCGCCAAGGCCGAAAAGGCGGACAAGGGCGAGTAA
PROTEIN sequence
Length: 369
MDAVVKGASISVANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKIVDKSGAWYAYNGEKIGQGRDNAREFLRENPELSREIENKVRESLGIPLLAADAGATPEKPQKAAKAEKADKGE*