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SCNpilot_cont_1000_p_scaffold_1067_25

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(21968..22651)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Comamonas testosteroni RepID=UPI0003101052 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 227.0
  • Bit_score: 383
  • Evalue 1.20e-103
  • rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EGP48468.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 227.0
  • Bit_score: 379
  • Evalue 4.20e-102
polar amino acid ABC transporter, inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 227.0
  • Bit_score: 377
  • Evalue 3.60e-102
  • rbh

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Taxonomy

Achromobacter insuavis → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
TTGAACTACCAGTTCGACTTCGCACCCGTGCTCGCGCAGTGGCCGCTGCTGCTCGAAGGCGCATGGACGACCGTGCAGCTGTCCTTCCTGGCCACCGTGCTGGGCTTCGCGCTGGGTACCGTCTGCGCACTGGGCCGCAACAGCAAGCATGGCTGGCTGCGCGGCCTGACGGGCGGCTACGTGGAGGCGATCCGCAACACGCCGCTGCTGATCCAGAGCTACTTCCTGATCTTCGGCCTGTCGAGCGCGGGCGTGACGATGCCGATCATGGTCGGCGCGGTGCTCGCGCTGGTGGTGAACATCGGCGCCTACAGCTGCGAGATCATCCGCGCGGGCATCGAGTCGATCCACAAGGGCCAGCTCGAAGCGGCCGAATGCCTTGGCCTGTCGAAGGTGCAGGTGTTCTGGCACGTGATCCTGCGCCCGGCGGTGGAGCGCGTATACCCGGCGCTCGCCAGCCAGTTCGTGCTGCTGATGCTGGCCTCCAGCATCATGTCGTCGATCGGCGCGGAAGAGCTCTTCGGCGTGGCCAACCGCATCCAGTCGGACACCTTCCGCAACTTCGAGATCTTCATCGTGCTGTGGGTGGTGTACCTAGCGCTGTCGTACGCGATGCGCCTGGGCTTCTGGCTGCTCGGCATGATCGTGTTCCCACGCCGGCGCAAGCTCGGCACGCCGTTGTGA
PROTEIN sequence
Length: 228
LNYQFDFAPVLAQWPLLLEGAWTTVQLSFLATVLGFALGTVCALGRNSKHGWLRGLTGGYVEAIRNTPLLIQSYFLIFGLSSAGVTMPIMVGAVLALVVNIGAYSCEIIRAGIESIHKGQLEAAECLGLSKVQVFWHVILRPAVERVYPALASQFVLLMLASSIMSSIGAEELFGVANRIQSDTFRNFEIFIVLWVVYLALSYAMRLGFWLLGMIVFPRRRKLGTPL*