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SCNpilot_cont_1000_p_scaffold_862_17

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14349..14942)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Variovorax sp. CF313 RepID=J2KHX8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 197.0
  • Bit_score: 362
  • Evalue 2.50e-97
  • rbh
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EJL79810.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 197.0
  • Bit_score: 362
  • Evalue 3.50e-97
cobalt transport protein; K02008 cobalt/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 197.0
  • Bit_score: 328
  • Evalue 1.30e-87
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGCGTAGCCTCTATTCGGAACAGCCGACGTGGATGCATGCGATTGCGGCGTGGGCCAAGCTCGCGGTGCTGTCGGTGTGCGGCACGCTGCTGGTGCTGGTCGAGCGGCCTTTGACGCTGGCCGTGGCCTGCGTCGTGGTGCTGGGCATCTTCGCGTCGCTCGGGCCGCCTGCGTGGCGCCGCGTGCGCATGCTGCTCGGCGTGGCCATCGCCGGGGCCTTGATCGTCGGCTTCCACTGGGCCATGGGCACGACGCCATTGGGTGTGGCCAGCGCGCTGCGGCTCGCGAGCGCGGCCACGCTCGCGCTGATGCTGACGCTGACCACGCGCTTCGAAGACCTGCTGGCGGTGCTCGAAGCGGTGCTGCATCCGCTGCAGCGCATTGGCGTGCCCACAGAGCGGATCGCGCTCGGCCTTGGCCTGATGCTGCGCTTCGCCGAAAATTTCTATGTGCAGTGGCAGCGTCTGGACGACGCCTACCGCGTCCGCGCGGGCCACGGCGGCGGCCTGCGGTTGCTGGCGCCCCTGACCATCCGCACCCTGCAGACCGCCGAGCGCGTGGCCGACGCGCTGGCCGCACGACTCGGCCGCTGA
PROTEIN sequence
Length: 198
VRSLYSEQPTWMHAIAAWAKLAVLSVCGTLLVLVERPLTLAVACVVVLGIFASLGPPAWRRVRMLLGVAIAGALIVGFHWAMGTTPLGVASALRLASAATLALMLTLTTRFEDLLAVLEAVLHPLQRIGVPTERIALGLGLMLRFAENFYVQWQRLDDAYRVRAGHGGGLRLLAPLTIRTLQTAERVADALAARLGR*