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SCNpilot_cont_1000_p_scaffold_9389_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 264..1823

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003612853 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 515.0
  • Bit_score: 817
  • Evalue 9.80e-234
  • rbh
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 513.0
  • Bit_score: 644
  • Evalue 2.10e-182
  • rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACS20802.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 513.0
  • Bit_score: 644
  • Evalue 9.40e-182

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGAAGAATTGGAATACGAGCCAGCGCCTGGGCGCCGGCTTCGCGGTCGTGCTCGCGCTGGTGGTGCTGATCGCCGGCGTCGGTGTGCTGCGGCTGCAGGCGGTGGGCGAAGCCACCAAGGACATGGCCCGGCAGTCGCTGGTGAAGGAACGCCTGGCTTCGGCCTGGCAACTGGGCACCACCACCAACAGCGTGCGCACCGTCTCGCTGCTCAAGAGCAACGACGCCGCGGTGCAGGACTACCTGCAAAAGAGCATCGCCGGCACCAGCGCCAGCATCTCCGAAACGCAGAAGAAGCTCGAGGATATGCTGGCGGCTCCCGCCGAACTGGCGCTGAGCGCCGACATCAGGAAGAAGCGCGGCGACTATGTCGAGCTGCGCAACAAGCTGCTCAAGCTGAAGGCCGGCGGCCAGCCGGAAGAAGCCGCCAAGCTCACCGACACGCAACTGCTGCCCGCGCTCGAAAGCTACGACGCCAGCATCCGCGCGATGGTGACGCTCCAGCAGCAGCAGATCGACCGCACGGCCAATGACATCGAGGCCCAGTACCAGTCGGGCCGCGTCTATCTCATCGTGCTGGCCGTGTTCGCGCTGGCGCTGGGTTCGGTCATCGCATGGCTGCTGACGCGCGGCATCGTGCAGCCCATCGGGGAGGCGCTGCTGATTGCCGAAACCGTGGCCTCCGGCGACCTGAGCCAGGAATTCGAGACCGATCGCGGCGGCGACTTCGGCCGGCTGCTGCGCGGCATGGGCGAGATGGAAGACACGCTGACCGACCTGGTGACGCGCATCAAGGCTTCCACCGATTCGATTGCCGTGGCGTCGCGGCAGATCGCGGCGGGCAATGAAGACCTGTCTTCGCGCACGGAGCAGCAGGCCAGTTCGCTGGAGCAGACGGCGGCTTCGATGGAGGAGCTCACGAGCACCGTGAAGCAGAACGCGGACAACGCACGGCAGGCGAACCAGCTCGCCGTGTCGGCTTCCGCCGTGGCGGTGAAGGGCGGCAGCGTCGTGTCTCAGGTGGTGGACACCATGGGATCGATCAATGCGTCGTCCCGGAAGATCGTCGACATCATCGGTGTCATCGACGGCATTGCCTTCCAGACGAATATCCTGGCATTGAACGCGGCCGTGGAAGCCGCCCGCGCGGGCGAGCAGGGCAAGGGCTTTGCCGTGGTCGCCTCCGAGGTGCGCAACCTGGCGCAGCGTTCGGCGTCGGCGGCCAAGGAAATCAAGACCCTCATCGGCGACTCGGTGGAGAAAGTCGAAGAAGGCAGCAAGCAGGTCAGCGAAGCGGGCCGCACCATGGACGAGATCGTCGGCAGCGTGCGCCGCGTGACGGACATCATGGGCGAGATCACCGCCGCGAGTCAGGAACAAACCTCCGGCATCGAGCAGATCAACCAGGCCATCACGCAGATGGACCAAGTGACGCAGCAGAACGCCGCGCTGGTCGAGCAGGCATCGGCCGCCGCGCAGTCGCTGCAGGAGCAGGCCGACAACCTCGTCAGGGCGGTGAGCACCTTCAAGCTCGACGCCGACGAGACCGTGGCGGCCTGA
PROTEIN sequence
Length: 520
MKNWNTSQRLGAGFAVVLALVVLIAGVGVLRLQAVGEATKDMARQSLVKERLASAWQLGTTTNSVRTVSLLKSNDAAVQDYLQKSIAGTSASISETQKKLEDMLAAPAELALSADIRKKRGDYVELRNKLLKLKAGGQPEEAAKLTDTQLLPALESYDASIRAMVTLQQQQIDRTANDIEAQYQSGRVYLIVLAVFALALGSVIAWLLTRGIVQPIGEALLIAETVASGDLSQEFETDRGGDFGRLLRGMGEMEDTLTDLVTRIKASTDSIAVASRQIAAGNEDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASAVAVKGGSVVSQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRNLAQRSASAAKEIKTLIGDSVEKVEEGSKQVSEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEQASAAAQSLQEQADNLVRAVSTFKLDADETVAA*