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SCNpilot_cont_1000_p_scaffold_9389_5

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3964..4947

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 327.0
  • Bit_score: 418
  • Evalue 8.40e-114
putative methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 329.0
  • Bit_score: 341
  • Evalue 3.10e-91
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGU51417.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 329.0
  • Bit_score: 341
  • Evalue 1.40e-90

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAGTTTGAAGGATCTGAAAATCGGCACGCGCCTGGGGCTCGGCTTCGCGGTCATGCTGCTGCTGATGGCTTTCATTGCCGCCACCGGCGTGCTGCGGCTGACCAATGTGGGGCATGCCACCGACGAGATGGTGGAGCAGGCGCTGGTGAAGGAGCGCCTGGCCAACGAATGGCTGAGCAACCTCAAGTCGAACACGGTGGCCAACTTCGCGATGATCAAGACCACCGATCCAGCCGTCGCAGACTATTTCTCCAAACTCCAGGCCGCCGGCTCGGCCCGCATCAGCCCGGCGCAGAAGAAGCTCGAATCGATGCTGGACACGCCGGAAGAAAAGGCGCTCTATGCCAAGGTCGCCGCTTCGCGCGCCGTGGTGCTCGAGACGGTGGGCGTTCTCAACAAGCTCAAGGACAGCGGCCAGCTCGCCGAAGCGAACACGCTGGTCGACACCAAGTTCACCGACGCGCTGGGCGTCTATGGCGGCGCCGTCGAGGCGCTGGCCCAGCACCAGCGCGAGAAGATCGATGCCGCCGCCCGCGGCATCGCCGCCGACTACGTGGCGGGGCGCACCACGCTGGTGGTGCTGGCGTCCATCGCCGTCTTGCTGGGCGCGCTGTTCGCCTGGCGCCTGAGCCTGGGCATCGTGCGCCCGCTGGGCCATGCGGTGGAAGTGGCGCAGACCGTCGCGGCCGGCGACCTGAGCGCCGACATCCGCGTGGAAAGCCGCGACGAAGCCGGCCAGCTGATGCAGGCGCTGAAGAACATGAACGAGAGCCTGGCCAAGGTGGTCGGCGAGGTGCGCACAGGCACGGACACGATCGCGACGGCTTCGAGCCAGATCGCTTCGGGCAACCAGGACCTGTCTTCGCGTACCGAAGAGCAGGCGAGTTCGCTGGAGCAAACCGCGGCTTCGATGGAAGAGCTGACTTCGACGGTGAAGCAGAACGCGGACAACGCGCGTCAGGCGAACCAACTGGCCGTGTCG
PROTEIN sequence
Length: 328
MSLKDLKIGTRLGLGFAVMLLLMAFIAATGVLRLTNVGHATDEMVEQALVKERLANEWLSNLKSNTVANFAMIKTTDPAVADYFSKLQAAGSARISPAQKKLESMLDTPEEKALYAKVAASRAVVLETVGVLNKLKDSGQLAEANTLVDTKFTDALGVYGGAVEALAQHQREKIDAAARGIAADYVAGRTTLVVLASIAVLLGALFAWRLSLGIVRPLGHAVEVAQTVAAGDLSADIRVESRDEAGQLMQALKNMNESLAKVVGEVRTGTDTIATASSQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAVS