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SCNpilot_cont_1000_p_scaffold_13744_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(461..1387)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DC5E1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 308.0
  • Bit_score: 504
  • Evalue 6.40e-140
  • rbh
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 307.0
  • Bit_score: 415
  • Evalue 2.10e-113
  • rbh
Phage integrase family protein {ECO:0000313|EMBL:ABR64815.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 307.0
  • Bit_score: 415
  • Evalue 9.40e-113

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGACGGATCTACATTCGGCACTGCAGCGGTACCTGAACATGCGCAAGGGCTTTGGATTCAAGTATCAGCATCAGACACGACGGCTCGCCGACTTCGTCTCCTTCATGGACAAGTGCAAGGCCACGACCATCACCACGAAGCTCGCGATGGAGTGGGCGACGTTACCTGCCGGTCGGCATGCGTCCTGGGCATTGCGGCTGACGGATGTTCGCGGATTTTCGCGACATATCGCAAGCTTCGATCCAAAGACGGAAGTGCCTCCGGTCGGTCTCCTGCCAAGCCTGAAGCGTGCCAAGCCCTACGTCTATAGCGATGAAGACGTCAGCGCGTTGCTGGCAGCCGCCCTGTCCTTGCCGCCAGCAGGTGCACTGCGCCGCTGGACCTACCACTGCCTGTTCGGACTGATCGCAGTGACGGGCATGCGTCTGTCCGAGGCGATCGGCCTTGAATGTGGCGACGTTGACCTGGACGCCGGCGTGCTGACGATTCGGTTGACCAAGTTTAGGAAGTCACGGCTCGTACCTCTGCATCCAACGACGAGCGCAGCGCTACGAGATTACAAGCAACGGCGCGACACCCATCTACCAACGCGCCGCACCCCACACTTCTTCGTTGCGGAGCGCGGTGGACCACTGCTGCATCAGTACGTCCACCGCGTCTTCTGGCGCTTGTCGCGTGAGATCGGTCTGCGGCGTCCTGGCGATCATGCGGGGCCGCGCGTGCACGACTTCCGGCACCGATTCGCTATCTGCACGCTGTTGGGGTGGTATCGCAAAGGCCTCGATGTCGAGAAGCAACTCCCTTCGCTGTCCACCTATCTTGGCCACACCTGCGTGCGCGACACCTATTGGTACCTCTCGGCGTGCCCGGAGCTGATGCAAGAGGCGGCGCAGCGTCTCGATAGACGGTGGGAGACTCAACCATGA
PROTEIN sequence
Length: 309
MTDLHSALQRYLNMRKGFGFKYQHQTRRLADFVSFMDKCKATTITTKLAMEWATLPAGRHASWALRLTDVRGFSRHIASFDPKTEVPPVGLLPSLKRAKPYVYSDEDVSALLAAALSLPPAGALRRWTYHCLFGLIAVTGMRLSEAIGLECGDVDLDAGVLTIRLTKFRKSRLVPLHPTTSAALRDYKQRRDTHLPTRRTPHFFVAERGGPLLHQYVHRVFWRLSREIGLRRPGDHAGPRVHDFRHRFAICTLLGWYRKGLDVEKQLPSLSTYLGHTCVRDTYWYLSACPELMQEAAQRLDRRWETQP*