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SCNpilot_cont_1000_p_scaffold_13744_5

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3918..4196)

Top 3 Functional Annotations

Value Algorithm Source
transposase IS66 n=1 Tax=Variovorax paradoxus RepID=UPI00036D1B40 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 92.0
  • Bit_score: 154
  • Evalue 6.40e-35
Transposase {ECO:0000313|EMBL:AGJ70656.1}; TaxID=1232667 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 92.0
  • Bit_score: 153
  • Evalue 2.00e-34
IS66 Orf2 family protein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 93.0
  • Bit_score: 128
  • Evalue 9.00e-28

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Taxonomy

Comamonas sp. 7D-2 → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GAGCGCCTGATGGCGCACGTCGTGCACGCCATGGGCAGCGCCCGTGCGCATCACGGGTATCTCTTCGCCAATGGGCGCGCCACGCGCGTGAAGCTGCTCGTGCACGACGGCTTTGGCGTTTGGTGCGCTGCCAGGCGACTGAACTCCGGCCGGTTCATCTGGCCGCGCGAGATCGACGGTACGGCGCCGCTGGCGTTGACGCAGGTGCAGTTCGATGCGCTGGTGGTAGGGCTGCCTTGGCAGCGGCTGCCCGAGATGAGCGTGATCACGCGGCTGTAA
PROTEIN sequence
Length: 93
ERLMAHVVHAMGSARAHHGYLFANGRATRVKLLVHDGFGVWCAARRLNSGRFIWPREIDGTAPLALTQVQFDALVVGLPWQRLPEMSVITRL*