ggKbase home page

SCNpilot_cont_1000_p_scaffold_36151_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2..544)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003794E4D similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 181.0
  • Bit_score: 272
  • Evalue 4.10e-70
Uncharacterized protein {ECO:0000313|EMBL:EJL71039.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 181.0
  • Bit_score: 254
  • Evalue 9.50e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 181.0
  • Bit_score: 214
  • Evalue 2.40e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGCCGACGCATCGAGAAACTTTTCGAGCACACCAAGCTGCTGTGCTTCGGACGCTATGTACTGACCGCTCCAATCGCCTCACGCCTGGAATTCGGTCGTGACTTTCCGACGCTGCCGGATCAGGCCGACGACATCGAGAAGGTGATGGCTGCCGAGCGGGCAAAGATTCTGAAGGGCCACAAGACCGCCGAAATCACCTATTTCGGCAAGGGCCCAGTTGCAAATACCTGGCTGATCCGCTCCTACGGGGACAAGTTCGCGAAAGAACTGGAACTGGAGGGCTTCCGCATCTATTACATCGTTGGCCCGCACATCTTCATGGAGGGGACCGCCACCGCCAAGAGCCAGAACATGACCGTGGAACGGATCTTCAAGGACATCGTGGAGACCGCAAGTAACCTGCGCCTTCGCTCGCCCGACGAAGTCCCCAGAGATCAGGGCCTGTGCCATGAATACGGCTTTACCCGGGTCGATGGCTCTCAAGGTGCGGCGTTCTCTCAAGCAGGCCTGCATATGGCCGCCCTGCCCGACGTAGTTTTC
PROTEIN sequence
Length: 181
MSRRIEKLFEHTKLLCFGRYVLTAPIASRLEFGRDFPTLPDQADDIEKVMAAERAKILKGHKTAEITYFGKGPVANTWLIRSYGDKFAKELELEGFRIYYIVGPHIFMEGTATAKSQNMTVERIFKDIVETASNLRLRSPDEVPRDQGLCHEYGFTRVDGSQGAAFSQAGLHMAALPDVVF