ggKbase home page

SCNpilot_cont_1000_p_scaffold_675_11

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(11931..12797)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 261.0
  • Bit_score: 186
  • Evalue 1.10e-44
Diaminopimelate epimerase n=1 Tax=uncultured bacterium RepID=K2FFN4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 246.0
  • Bit_score: 320
  • Evalue 2.10e-84
  • rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 246.0
  • Bit_score: 320
  • Evalue 2.90e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAAAAAACATCGTCAGTCCCAAGCGTCATCCCGGGATTTAGCCTCTCTTCCCAAGCCTCTCCAGAGGCGAGGGTTAGAGGGGCTCAATACCCGGGACCCAGGTTTTTGTGGTTCAAAAATTCCTTTTACAAAGATGCACGCCCTCGGAAATGATTTTATCTTGATTGAGAATAAACATCTTAAAACCAAACTAACACCCAAGCAAGTTCGCGTGCTTGCCAACCGACGTCATGGCATAGGGTGTGATCAAGTCATTGTGCTTCAAGAACCCAAAGGCGTTGATGCGGATATTTTTTTCTATAATGCGGATGGAAAACAAGCTTTAGCTTGCGGTAATGGGACGCGCTGTGTGGCTAAACATTTGAGCAAGAAAAAGGGCCTTATTCAAACGCCTACCTTTCTTTCGCAATTTTGGAACCGAAAAGATAAGATCACTATTTCATTGAGAGATCCACATTTTGCCCCCTCTATGCCTTTACCCCTATCTTTATCGAAAGGGTATTGTATCGATGTCGGTAATCCCCATGTCGTCATTTTTACTGAAGATCTAACCTCCATAGACCTGGAAGGACTCGCTCTTTCGCTCCAACCCCCACAAGGGATTAATGTGGAAATTGCTCAAGTCATTTCTCCAACAACAGTTAAAGTTAGAGTCTGGGAGCGAGGCGTTGGGATAACTCCCGCTTGCGGATCGGGTGCTTGTGCTGTAGGAATACTTAGTTTAAAATTAGACCTTATTAAAAAGACTCCCGTTTTTATTGAAATGGAGGGAGGAGTTTTAGAAGTTGATTGGAGTACTGGTGCCCCCCTTCTTTTAACGGGCGCTGCTCATTATTGTTTTGAAGGAATGATTGATCTTCCATGA
PROTEIN sequence
Length: 289
MKKHRQSQASSRDLASLPKPLQRRGLEGLNTRDPGFCGSKIPFTKMHALGNDFILIENKHLKTKLTPKQVRVLANRRHGIGCDQVIVLQEPKGVDADIFFYNADGKQALACGNGTRCVAKHLSKKKGLIQTPTFLSQFWNRKDKITISLRDPHFAPSMPLPLSLSKGYCIDVGNPHVVIFTEDLTSIDLEGLALSLQPPQGINVEIAQVISPTTVKVRVWERGVGITPACGSGACAVGILSLKLDLIKKTPVFIEMEGGVLEVDWSTGAPLLLTGAAHYCFEGMIDLP*