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SCNpilot_cont_1000_p_scaffold_675_25

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: 22018..22278

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 id=4896200 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 85.0
  • Bit_score: 145
  • Evalue 2.80e-32
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 82.0
  • Bit_score: 136
  • Evalue 5.30e-30
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 85.0
  • Bit_score: 145
  • Evalue 3.90e-32

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGCACAAAAGAAAGCTGGAGGAAGTTCTCGTAACGGTCGTGATTCCGCAGGGCGTCGCCTTGGTGTGAAGAAGTTTGGCGGCGAAGCCGTTATCCCAGGGAACATCCTTATTCGCCAACGTGGCACCAAATATTACCCTGGAGTCAAAGTAGGAATGGGACGGGATCACACCCTTTTTGCTCTTGCTGAAGGACACGTACAATTTTCACGTGGAGCAAATGGCAGAACATTTGTGTCTGTTGTGAGTAACGGGCAGTAG
PROTEIN sequence
Length: 87
MAQKKAGGSSRNGRDSAGRRLGVKKFGGEAVIPGNILIRQRGTKYYPGVKVGMGRDHTLFALAEGHVQFSRGANGRTFVSVVSNGQ*