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SCNpilot_cont_1000_p_scaffold_788_12

Organism: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 8324..9136

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6G2_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 261.0
  • Bit_score: 275
  • Evalue 5.50e-71
Hydroxymethylpyrimidine ABC transporter, transmembrane component {ECO:0000313|EMBL:AJW38232.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 244.0
  • Bit_score: 280
  • Evalue 3.20e-72
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 261.0
  • Bit_score: 275
  • Evalue 1.70e-71

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Taxonomy

Rhodococcus sp. B7740 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGACCGCCCCCACCGACGAGCGGCACGGTCGTCGCCCGGGTTCCGACGGGAGCGCCGTTCGTCGGAACGGATGGGTGGCGCCGGTCGCCTTCGGCGTCCTCGTGCTCCTGGTCTGGGAGGGCTTTGTCCGGCTCCTCGGCGTCCCGGCCTTCCTGCTGCCCGCGCCCACCGCGATCGGTGCGCAGATCGGCTCCCACCTCCCCGTCATCCTCGAGACCGCCGCCGTCACCGGCGGGAACGCGCTGGTGGGGCTCGTCGCCGGGTTCCTCGTCGGGGTGCTGCTGGCGCTGCTCGCGTCGGCGTCGCGGCTGGTGGCGGAGCTGACCACGCCCGTCGTACTCGCCGGGAGCGCCGTGCCGATCGTCGCGCTCGCGCCGGTGTTCACCACGATGTTCGGCTCCACCACCGAGATCCCGCGCCGGCTCGTCGTCACCGTCGTCGTGATCGTGCCCGTGTTCGTCTCGACGGTGCGCGGGCTGCGCGCCGTGGCGCCGGTGCACGCCGACCTCATGACGTCGCTGGCCGCCACGCCCGCCCAGTTCGCGCGCTTCGTGCGCGTGCCGGGCGCGGTGCCCTACATCATCACGGGACTGCGGCTCGCCGCCCCGGCCGCGGTGATCGCGTCGATCGTCGCCGAGTACTTCGGGGGGCTGCAGAACGGGCTGGGCAGCCGCATCACCTCGGCCGCCGCCAACACCGCCTACGCGCGTGCGTGGGCCTTCGTCGCCGCCTCGATCGTCCTGGGGCTGCTGTTCTACCTGGCCGGGCTGCTGGCCGAACGGCTCGCCACCCGCGGCCGCACCACCACCTGA
PROTEIN sequence
Length: 271
MTAPTDERHGRRPGSDGSAVRRNGWVAPVAFGVLVLLVWEGFVRLLGVPAFLLPAPTAIGAQIGSHLPVILETAAVTGGNALVGLVAGFLVGVLLALLASASRLVAELTTPVVLAGSAVPIVALAPVFTTMFGSTTEIPRRLVVTVVVIVPVFVSTVRGLRAVAPVHADLMTSLAATPAQFARFVRVPGAVPYIITGLRLAAPAAVIASIVAEYFGGLQNGLGSRITSAAANTAYARAWAFVAASIVLGLLFYLAGLLAERLATRGRTTT*