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SCNpilot_cont_1000_p_scaffold_1833_24

Organism: SCNPILOT_CONT_1000_P_Amoebophilus_asiaticus_42_9_0

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 36152..36688

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RIMM_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 172.0
  • Bit_score: 195
  • Evalue 3.70e-47
hypothetical protein; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 172.0
  • Bit_score: 195
  • Evalue 1.20e-47
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 172.0
  • Bit_score: 195
  • Evalue 5.20e-47

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCTCATCCAGATATAAACCATACTGAGATAGGTAAAATTATACAAGCCCGTGGCCTGAAAGGACAGGTAATAGCACACCTAGAGCCTGATTTAGCAACGCTTGACACCATCAAATATATCTTTATTAAAATAGGGACTACACTAGTGCCTTATGGAATAGAAGAAGCCACTTTACAAGACCATCGAGCATTACTAAAATTTCAAGGTATAGCAGATAAATCTGCAGCTCTTGAATTAATTAATAAAACTATCTGGCTACCACAAGAAGTTTTAGATACGATTATAGTCGTACACAAAACACACCAGGATGAAGCTCCAGTAGGATATTATGTAACAGATCTACACCAAGGCAAACTAGGTATTGTCCAGCGAATCGAACAGTTTCCCATGCATGCATGTTTGGTAATTGACTACTTCAACAAAGAGTTATTAATACCTCATGTGCCTACCTTCATTCAACACATAGATCACAAGAATAAGCAACTAACTGTGCAATTACCACCAGGATTCTTAGAGGCGGTAGGGTATAAATAA
PROTEIN sequence
Length: 179
MSHPDINHTEIGKIIQARGLKGQVIAHLEPDLATLDTIKYIFIKIGTTLVPYGIEEATLQDHRALLKFQGIADKSAALELINKTIWLPQEVLDTIIVVHKTHQDEAPVGYYVTDLHQGKLGIVQRIEQFPMHACLVIDYFNKELLIPHVPTFIQHIDHKNKQLTVQLPPGFLEAVGYK*