ggKbase home page

SCNpilot_cont_1000_p_scaffold_3839_3

Organism: SCNPILOT_CONT_1000_P_Amoebophilus_asiaticus_42_9_0

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2815..3729)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 252.0
  • Bit_score: 383
  • Evalue 5.10e-104
  • rbh
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 252.0
  • Bit_score: 383
  • Evalue 2.30e-103
tRNA pseudouridine synthase A n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU82_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 252.0
  • Bit_score: 383
  • Evalue 1.60e-103
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
ATGCGTTATTTTTTAGAGATAGCCTATCAAGGCACTCATTATCATGGTTGGCAGATACAACGGAATGCTACCACTGTGCAAGGCATTATTCAGGAGAAATTAACCCAACTATTATCAACCCAGATAGAAATCACTGGTAGTAGTAGAACGGATACAGGCGTACATGCCCAACAGCAATGGGCACACCTGGATATTCCGTTTGAGTTAAATGTAAATAAGTTACAATATAAGCTAAATCTCATATTGCCTCCGGATATCGCTATACTAGGTATGTATTCTGTAATTCCAACAGCGCATTCCCGCTTTGATGCAACCAATAGAACCTATGTATATAAGATAACTCGTACAAAAAATCCATTTTTATCTACCACCACCTATGCCTTTAGAAAAGAGCTAGATGTAGATACGATGAATGAAGCTGCAGTCATACTCAAGCTTCACAAAGATTTTGAAAGTTTTAGCAAGCTGGGTTCAGCTACTCCCCATCTTTATTTATGTGATATTTTGGAAGCAAATTGGTACACTAATTCTGAAGATCAACTTATCTTTCAGGTTACTGCTAATCGTTTTTTACGGGGTATGGTACGTGCTATCGTTGGGAATTTATTAGAAGTAGGGTTGGGAAAACTCAGTATTCAAGACTTTAAATATATCTTAGAACAAAAAGATCGTAGTTTAGGAGCTAGTTTGGTCCCTGCTTGTGGTCTTACTTTGAAACAAGTTAGCTATCCAACTAGTATATTTACAGAATTAAATAGATCTCTTCCGAAACCAAGAATTGGGTTATCTGGGCAAGAAGGAATTTGTGAGAAACCGGAGTTGTGGTGTCGGGGAGCGACTCCCGACACCACAATGGACTGTCAGGAAACTTTCCTGACAGCACAAGGCGGCGGTTTCGGAAAAAGTCTAATATAG
PROTEIN sequence
Length: 305
MRYFLEIAYQGTHYHGWQIQRNATTVQGIIQEKLTQLLSTQIEITGSSRTDTGVHAQQQWAHLDIPFELNVNKLQYKLNLILPPDIAILGMYSVIPTAHSRFDATNRTYVYKITRTKNPFLSTTTYAFRKELDVDTMNEAAVILKLHKDFESFSKLGSATPHLYLCDILEANWYTNSEDQLIFQVTANRFLRGMVRAIVGNLLEVGLGKLSIQDFKYILEQKDRSLGASLVPACGLTLKQVSYPTSIFTELNRSLPKPRIGLSGQEGICEKPELWCRGATPDTTMDCQETFLTAQGGGFGKSLI*