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SCNpilot_cont_1000_p_scaffold_906_20

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 18953..19855

Top 3 Functional Annotations

Value Algorithm Source
Cell shape-determining protein MreC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHZ4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 302.0
  • Bit_score: 453
  • Evalue 1.60e-124
  • rbh
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 301.0
  • Bit_score: 460
  • Evalue 1.90e-126
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 296.0
  • Bit_score: 398
  • Evalue 1.50e-108
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGAAATGGCCCCGCAGTTTTTCAGACACGGCCCGAGCTTGCAGGCACGGCTATTTTTCTTCGTGCTCCTGTCGTTGACACTCATGGCCGCTGATACCCATTTCAGATATCTGGCGGGAATTCGGCAAGTATTTGCCATCGCGCTCTATCCGCTGCAAAAGCTTGCCAATGTACCCATGACCCTCTCCGACACCATGGGTGCGGTTTTTGTCACCAATCATCTGGCGGACGAAAATGCCTATCTGAAGCAGCAATATCTGGCCGACAAGGGACAACTCCTGCAGTTGCAGGCATTACGGGCCGAAAACGACCAATTGCGCAAGTTGCTGGAAGCAGCGCAGCGCGTGGAAAGCAAGGCAGTCATCGCGGAGATCCTCCGCGTGCCCAGCGATCCCTTCAACCGCAAGATCATGCTGGACAAAGGCAGCCAGAGCGGGATACAGACGGGGCAGGTGGTTGTAGACGACGTGGGCGTGGTCGGGCAGGTCACCCGCAATTATCCCTGGGTATCGGAAGTGACATTGATTACGGACAAGGATCATTCCGTCCCGATACAGGTTGTGCGAAACGGGCTGCGTTCGGTCGTTTCCGGCACCGGCAAGGATGGGCTGCTGGAGTTGCGCTATGTCGCGGTAAACACGGACATTCGGTCGGGGGACGTACTGGTGACTTCGGGGATAGATGGCGTTTATCCGCCGGGACTTCCGGTAGCAAGCGTATCCAAGATCGAGCGTAGTCCCGCTTTCGTCTTCGCCCGCATCACCTGCACACCTACCGCAGGAGTAGGCCACCACCGGCAGTTGCTGATATTATCCCTGATGAACCCACCCGCCGAAACCCCGGCCGATGCATTCGAAATCAAGCCTGAGACAAGGAAGCGAGAAAAAGTTGGCATTCGCTGA
PROTEIN sequence
Length: 301
MEMAPQFFRHGPSLQARLFFFVLLSLTLMAADTHFRYLAGIRQVFAIALYPLQKLANVPMTLSDTMGAVFVTNHLADENAYLKQQYLADKGQLLQLQALRAENDQLRKLLEAAQRVESKAVIAEILRVPSDPFNRKIMLDKGSQSGIQTGQVVVDDVGVVGQVTRNYPWVSEVTLITDKDHSVPIQVVRNGLRSVVSGTGKDGLLELRYVAVNTDIRSGDVLVTSGIDGVYPPGLPVASVSKIERSPAFVFARITCTPTAGVGHHRQLLILSLMNPPAETPADAFEIKPETRKREKVGIR*