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SCNpilot_cont_1000_p_scaffold_906_23

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 22272..23372

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein RodA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 366.0
  • Bit_score: 648
  • Evalue 4.30e-183
  • rbh
Rod shape-determining protein RodA {ECO:0000313|EMBL:CCU62134.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 366.0
  • Bit_score: 648
  • Evalue 6.00e-183
rod shape-determining protein RodA; K05837 rod shape determining protein RodA similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 358.0
  • Bit_score: 606
  • Evalue 7.60e-171
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGACTGATCCCTTGCGGCTGTGGCACTACCTGACGCGCTACATCGACGGCTTCCTGCTGGTCGGGCTGTTGATGTTGATGACAACGGGGCTGATCACGCTTTATAGCGCCACCGACGCCAACCTCAGCCGTGTCACCAACCAGGGCATCAATATGCTGGTTGCGCTCGGCATCATGTGGCTCGTCGCCAATATTCCGTTGCAGCACATCATGCGCATTGCTTTTCCAATTTATCTGACCGGACTTCTGTTGCTGCTCTGCGTCATGCTCTTCGGAGAAATCAACAATGGGGCGCGGCGCTGGCTGAACCTCGGCGTGACGCGTATCCAGCCATCCGAACTGATGAAAATAGCGGTGCCGTTAATGATGGCATGGTATTTCGACATGCATGAAGCAACGTTAAGACTGAGGGATTACGGAGTGGCGACGTTGCTGCTGTTGCTGCCAGTCGTATTGATCCTGCGCCAGCCGGATCTTGGCACGGCGCTGCTGATCGCCGCCAGCGGCTTTTATGTGCTTTTCCTTACCGGATTGTCGTGGCGCATCATGGTCGGGCTGGCGATAGTGGGAGCAGGCAGCGTGCCATTCCTATGGTCGATGATGCATGACTATCAGCGGCGACGTGTCATGACCCTGCTCGATCCGACACAGGACGCGCTCGGCGCAGGCTACCACACCATACAATCCACTATTGCCATCGGATCCGGAGGCGTGCTCGGCAAGGGCTGGCAACATGGGACGCAAACTCATCTCGATTTTCTTCCCGAGAAAAGCACTGACTTCATCTTTGCCGTGTTTTCCGAGGAATTCGGTTTGGTGGGAAATTCGTTGCTGCTGCTGCTATATGTGGTCGTGATAGGCCGCGGCATGTTCATCACCGCCAATGCCCCGACCCAGTTCACGCGCCTGATCGCAGGGTCGATCACGTTGACGTTTTTCACCTATATCTTTGTGAACATGGGTATGGTCATCGGCATTCTGCCTGTAGTCGGCGTGCCATTGCCGCTGATCAGCTACGGCGGCACATCCATGGTGACAATGCTGTTGGGATTTGGTATTTTGATGAGCATTCAGACGCATCCCAAACTGGTAAAGACGTGA
PROTEIN sequence
Length: 367
MTDPLRLWHYLTRYIDGFLLVGLLMLMTTGLITLYSATDANLSRVTNQGINMLVALGIMWLVANIPLQHIMRIAFPIYLTGLLLLLCVMLFGEINNGARRWLNLGVTRIQPSELMKIAVPLMMAWYFDMHEATLRLRDYGVATLLLLLPVVLILRQPDLGTALLIAASGFYVLFLTGLSWRIMVGLAIVGAGSVPFLWSMMHDYQRRRVMTLLDPTQDALGAGYHTIQSTIAIGSGGVLGKGWQHGTQTHLDFLPEKSTDFIFAVFSEEFGLVGNSLLLLLYVVVIGRGMFITANAPTQFTRLIAGSITLTFFTYIFVNMGMVIGILPVVGVPLPLISYGGTSMVTMLLGFGILMSIQTHPKLVKT*