ggKbase home page

SCNpilot_cont_1000_p_scaffold_1741_17

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 19988..21400

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 472.0
  • Bit_score: 635
  • Evalue 5.10e-179
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 470.0
  • Bit_score: 614
  • Evalue 2.70e-173
  • rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DX27_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 472.0
  • Bit_score: 635
  • Evalue 3.70e-179
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGATCTGCGGGGAAAAATCGTGCTGGTGCTCGGAATCGGGGAAACCGGCTTGTCGATGGCCAAGTGGCTATCACGCTGCAAAGCGACGGTACGTGCAGCCGACACCCGTCTGGCTCCGCCGCGCCTTGCGGAGTTCAGGCAGAGTTTGCCTGAGGCTAGGATATATGAAGGCGGATTCGATGCCGGGGCATTTTCGGGCGTCGATCTTATCGGCATCAGCCCCGGAGTGCCTCTGTCCGAACCGCTGGTCAGGCGGGCTGTTGCGAATGGCGTTCCAGTCGTAGGCGACATGGAGCTTTTTGCATTGGCCTTGCAGACCATGCAACAGGAGGACGCCGCAAGACCCGGAATTATCGGCATTACCGGATCCAACGGCAAGACTACCGTAACCGCCATGGTGGGTGCAATGGCCAGGAAGGCCGGCTGGGACGTGGAGGTTGCGGGAAACATAGGGCCGGCCGTGCTGGATGCATGGATGCGCCGGCAGGATATGGGGCGATTTCCACGGGCGTGGGTATTGGAGATGTCGAGTTTTCAGCTGGAAACCACACAAAGCCTGTTCCTGGATGCGGCAACCGTGCTGAACGTGACTGAAGATCATCTCGACCGTTACGCGAGCATGGAGGATTACGCAGCTGCCAAAGCCGGGATATTTCTGAAGAGCGGCCCGAGTGGCGATAGGGAAGGCGTGCAGGTGATCAACCGGGATGATCCTCTGGTCCGCGCCATGGGGTCGAGCGGAAGGAAGCAAGTGACATTCGGATGCGGTATGCCTGAGAGAGAGGAGGATTATGGCCTGCTATCCGAAGGAAATGACATCTGGCTGGTGCAGGGGAAGAAGCGGCTGATGAAAGCCAGCGAGCTTGCGGTAACAGGCCGGCATAACGCGACCAATGCGCTCGCCGCACTGGCATTATCCCGCGCGCTGGCGTTGCCTCTGGAACCTTTGCTCGAAGCGCTGCGCGAATTCAGGGGATTGCCGCACCGGATGGAGAAAGTGGCGGTGATGGAGGATGTGACATTTTACGATGACTCCAAGGGAACGAATGTAGGCGCGACGGTGGCCGCCCTGAATGGTTTGTCCCAAACGGTCGTGCTGATAGCAGGTGGAGACGGCAAAGGCCAGGATTTTTCGCCGCTGGCCGGGCCTGTTGCCCGACATGCTCGTGCCGTGGTGCTGATAGGGCGGGACGCGAAAAATATGGCCGCTGCGCTGGAGCGTGGCGGCGTGCCGCTATATTTTGCCTCGAACATGGAAGAGGCGGTGCAGCAAGGGTTTGCGCTGTCGAAACAGGGGGACGCGGTGCTCTTGTCGCCGGCATGCGCAAGCCTGGACATGTTCAGGAATTACGTGCATCGGTCCGAAGTATTCGTCGCGGCTGTGCGGGCGCTCCCAAAGGGAGCGCGATGA
PROTEIN sequence
Length: 471
MDLRGKIVLVLGIGETGLSMAKWLSRCKATVRAADTRLAPPRLAEFRQSLPEARIYEGGFDAGAFSGVDLIGISPGVPLSEPLVRRAVANGVPVVGDMELFALALQTMQQEDAARPGIIGITGSNGKTTVTAMVGAMARKAGWDVEVAGNIGPAVLDAWMRRQDMGRFPRAWVLEMSSFQLETTQSLFLDAATVLNVTEDHLDRYASMEDYAAAKAGIFLKSGPSGDREGVQVINRDDPLVRAMGSSGRKQVTFGCGMPEREEDYGLLSEGNDIWLVQGKKRLMKASELAVTGRHNATNALAALALSRALALPLEPLLEALREFRGLPHRMEKVAVMEDVTFYDDSKGTNVGATVAALNGLSQTVVLIAGGDGKGQDFSPLAGPVARHARAVVLIGRDAKNMAAALERGGVPLYFASNMEEAVQQGFALSKQGDAVLLSPACASLDMFRNYVHRSEVFVAAVRALPKGAR*