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SCNpilot_cont_1000_p_scaffold_3032_21

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 21175..22152

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:KIO50088.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 316.0
  • Bit_score: 444
  • Evalue 1.50e-121
pseudouridine synthase RluD; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 319.0
  • Bit_score: 416
  • Evalue 7.60e-114
  • rbh
Pseudouridine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DID4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 317.0
  • Bit_score: 435
  • Evalue 5.00e-119
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGAATGAAGTGGTGGATGAGGGTGGCGACGGACAGCGCATAGATAATTTCCTGTTCAAACGGCTTAAGGGAGTACCTAAAACCCACATCTATCAGTTATTGCGGAGCGGGCAGGTGCGGCTCAACAGCAAACGGGTGGACGCTGGCTGCCATTTGCAGTCGGGTGATGTGGTGCGTATTCCGCCAGTTCGCACCGGGGTCAGGCCTGTGCCTGGACATGGCGGCGTCAAGCCCGCGCCTTTTCCATTCGAAATCCTGTTTCACGATGAGGCGCTGATCGTACTCAACAAGCCTGCCGGCATGGCCGTGCATGGCGGAAGCGGCGTGAGCCAGGGTGTGATAGAGCATTTGCGCGCCCAGCATCCCGAGTGGAAATTCCTGGAACTGGTCCATCGTCTCGACAGGGGAACATCGGGCGTCCTGTTTCTTGCCAAGTCCCGCGCAGCGCTGATCGAACTGCATCGGCAAATTCGGGCGGGGCAGATGGAGAAACGCTATCTGACTCTGGTGAAGGGAAAGTGGCGGAATCCGAGGCAAGCTGTACGGTTGCCGCTCCACAAGTATGTCACCCCCACCGGGGAAAGGCGGGTGGTTGTGGCATCTGCGGACGGATTGGATGAAAAGGGGGCAATGCCCGCTCATACCATTTTCATTCTCAAAAAATCATGGCCTGATTTCAGCCTGCTGGAAGCGGAACTAAAGACAGGCCGAACTCATCAAATTCGCGTGCATCTGGCCCATCTCGGATTCCCGATCGTGGGGGACGACAAATATGGCGATTTTGACTTGAATAAACGATTATCCAGGGAGATGCCGGCAAAAGGGCTGAAACGCCAGTTTCTTCATGCTGCTGTGGCGGAAGTGGCGCATCCCGTCACCGGGAGGCGACTGCGGGTCGACGCGCCTTTGGCCATCGATCTGCGGACATTCCTGGAACAACTCGACCTTCCGGAAACCAGTGTAGTGAAGCGCTCTTGA
PROTEIN sequence
Length: 326
VNEVVDEGGDGQRIDNFLFKRLKGVPKTHIYQLLRSGQVRLNSKRVDAGCHLQSGDVVRIPPVRTGVRPVPGHGGVKPAPFPFEILFHDEALIVLNKPAGMAVHGGSGVSQGVIEHLRAQHPEWKFLELVHRLDRGTSGVLFLAKSRAALIELHRQIRAGQMEKRYLTLVKGKWRNPRQAVRLPLHKYVTPTGERRVVVASADGLDEKGAMPAHTIFILKKSWPDFSLLEAELKTGRTHQIRVHLAHLGFPIVGDDKYGDFDLNKRLSREMPAKGLKRQFLHAAVAEVAHPVTGRRLRVDAPLAIDLRTFLEQLDLPETSVVKRS*