ggKbase home page

SCNpilot_cont_1000_p_scaffold_3032_23

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 23678..23971

Top 3 Functional Annotations

Value Algorithm Source
Virulence-associated protein A n=1 Tax=Microcystis sp. T1-4 RepID=I4IEH6_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 98.0
  • Bit_score: 132
  • Evalue 2.10e-28
Virulence-associated protein A {ECO:0000313|EMBL:CCI32700.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 98.0
  • Bit_score: 132
  • Evalue 2.90e-28
HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 80.0
  • Bit_score: 121
  • Evalue 2.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microcystis sp. T1-4 → Microcystis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGAAAAATCCTGTTCACCCGGGCCGGATAGTGAAAGGGGCACTTGATGAGTTGAATCTAACCGTGACCGGTGCGGCTAAGGCTTTAAACGTGTCGCGCCCCACGCTGTCCAGCCTCATCAACGAGAAGGCCGGTATATCGCCGGAAATGGCCGTGAGGCTGTCGAAATCCATGGGAAGCACCCCCGCTTTCTGGATGCGGCTACAGATGATCTTCGATCTTGCCCAAGTCGAGGCTCGTGCCGATACGATTATTGTCAATCACGTGGTTCAGACGCATTTGACGATAGGGTAA
PROTEIN sequence
Length: 98
MKNPVHPGRIVKGALDELNLTVTGAAKALNVSRPTLSSLINEKAGISPEMAVRLSKSMGSTPAFWMRLQMIFDLAQVEARADTIIVNHVVQTHLTIG*