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SCNpilot_cont_1000_p_scaffold_5062_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 2271..3434

Top 3 Functional Annotations

Value Algorithm Source
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUS8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 387.0
  • Bit_score: 562
  • Evalue 3.20e-157
  • rbh
Cation transporter {ECO:0000313|EMBL:KIO48957.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 388.0
  • Bit_score: 565
  • Evalue 7.00e-158
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 387.0
  • Bit_score: 536
  • Evalue 7.80e-150
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGAAACTCGGAATGAAAAGTCTCGGTACGGCTGTACTTGCTGCACTATTGTCTGCATGCAGTGGTGGGGAGGAGCAGGTAACCCAGAAAAAAGAAGAGGTGGCGCCGCAGAAGGCAGCCGATTTCAACAGCGTCACGCTCAAGCCGGAAATGGCGCAGCGGGTCAGGATCGGGCACCCCACCATGGTGGATATCGCGGACAAGTTGCAGGTGCCGAGCCAGGTGGATGTGGACGAATACCGGCTCGTGCGGGTCGGCGCCAATGTGACAGGCCGTATTGTCGATGTGTATGCGATGCTGGGCGATACCGTCACGGCGGGAGCGGCGCTGGCTCGCATTTCCAGTCCGGAACTGACCCAGGCGCAGCTCGCCTATCTGCGGGCGTCTTCGCGCGCAACCCTGGCGGAAAAGGCGGCGGAGCGGGCGCGTCAGATGCTGGCTGCGGATGTGATCGCCGTTGCCGAGGTGGAACGGCGCGAGTCGGAATTGCAGGTATCCCAGGCGGATCTGGAGGCTGCAAAGGACCAGTTGCGGCTGCTGGGCGTGGATAGCGGCGCGTTGAAGGAGTTGATAACCAAGGGGCACATTCTGCCTTCGGTAACCATCAGCGTGCCGCTTGGCGGCGTGGTCATCGAACGCAATGTCGCCATAGGCCAGGTGGTGCAGCCCTCCGAACAATTGTTCCGGGTTGCGGATTTATCGTCCGTCTGGGTCGTGGGCGATGTGCCGGAGCAAATCGCCCGCAATGTCCGGGTGGGCCAACACGTGGAAATCCACGTTCCGGCTCTGGGCGAGGTGAGTTTCGATGGGCTTATCATTTTCGTGGCCGATACGGTTAATCCGCTTACCCGGACGGTGATGGTGCGTACTGCAGTGGAAAATCCCCAGCGCAAGCTCAAGCCGGACATGCTTGCCACCATGCATATCACCGACAATCCCCACAAGAGCCTGGTTGTGCCGGAAACCGCCGTGGTGCGCGAAGCGAACCGCGACTATGTATTTTTGGCACAGGGCAATAACCGGTTTCTGCGCGTGCCGGTAGAACTGGGGCACGAGGTGGCGGATATGCGGCCGGTTATTCGAGGACTGAGCGTGGAGCAGAGCATCGTCGTGGACGGCGCCTTCCACCTGGATAACGAGCGCAAGCTCGCCGAGCTGGAGTAG
PROTEIN sequence
Length: 388
MKLGMKSLGTAVLAALLSACSGGEEQVTQKKEEVAPQKAADFNSVTLKPEMAQRVRIGHPTMVDIADKLQVPSQVDVDEYRLVRVGANVTGRIVDVYAMLGDTVTAGAALARISSPELTQAQLAYLRASSRATLAEKAAERARQMLAADVIAVAEVERRESELQVSQADLEAAKDQLRLLGVDSGALKELITKGHILPSVTISVPLGGVVIERNVAIGQVVQPSEQLFRVADLSSVWVVGDVPEQIARNVRVGQHVEIHVPALGEVSFDGLIIFVADTVNPLTRTVMVRTAVENPQRKLKPDMLATMHITDNPHKSLVVPETAVVREANRDYVFLAQGNNRFLRVPVELGHEVADMRPVIRGLSVEQSIVVDGAFHLDNERKLAELE*