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SCNpilot_cont_1000_p_scaffold_5062_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 7579..8259

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 184.0
  • Bit_score: 306
  • Evalue 1.90e-80
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCU63124.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 184.0
  • Bit_score: 306
  • Evalue 2.60e-80
slmA; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 184.0
  • Bit_score: 295
  • Evalue 1.40e-77

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGGCCAGGGAGCCTGAGGCGTGGGCGCTTGCATACACGCAGGGCATGCAGCGCCGCCACGGCTTTATCGAGGGAAACATGGCAGTTAGTAGGGCAGGAGACAGAAAGGATCAAATTCTGCAGGCGCTGGCCGAAATGCTGGAAGGCCCCCGGGCGGAAAAAATCACTACTGCAGCACTTGCCGCCCGGCTCGATGTGTCAGAAGCCGCTCTCTACCGCCATTTCGCCAGCAAGGCGCAGATGTTTGACGGATTGATCGAATTCATCGAAAAAACACTTTTCAGCCTTATCAACAAGCTGATAACGGAAGAGAAGAACGGCATGCGGCAGGTCGAAGGCATCGTGTCGCTTCTGCTCGGTTTTTCCAGGAAGAATCCAGGCATGACCCGCGTGCTCATTGGCGATGCGCTAATAAACGAAAACGACCGTTTGCAGTTGCGGATAAACCAGTTGCACGACCGGCTCGAGGCAACTCTCAAGCAGGTGTTGCGCTTTGCGGCAAGCGAGGGGGAGATTCCGGCTGATCTGGATGCTGCTGCCCAGGCAAACCTGCTGATGTGTTTTGTGGCAGGGCGCTGGCACCAGTTTGCCAAGAGCGGATTCAAGCGCGACCCGGTGGAGCATTGGGAGGCGCAGCGCATCGTGTTGTTTTTGCCTCTTGGCCGGCATGAGACAGGCTGA
PROTEIN sequence
Length: 227
VAREPEAWALAYTQGMQRRHGFIEGNMAVSRAGDRKDQILQALAEMLEGPRAEKITTAALAARLDVSEAALYRHFASKAQMFDGLIEFIEKTLFSLINKLITEEKNGMRQVEGIVSLLLGFSRKNPGMTRVLIGDALINENDRLQLRINQLHDRLEATLKQVLRFAASEGEIPADLDAAAQANLLMCFVAGRWHQFAKSGFKRDPVEHWEAQRIVLFLPLGRHETG*