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SCNpilot_cont_1000_p_scaffold_7262_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(3..356)

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 195
  • Evalue 7.60e-48
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9U1_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 195
  • Evalue 2.40e-47
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module {ECO:0000313|EMBL:ABB74480.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 195
  • Evalue 3.40e-47

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGTCCAAGGCAGATCTTCTTAAGATCTACAGGGCCAGGCGCGATTTCTCCAAGACGACGGAGCCAAGCGGAGAAGATCGAGGCGAAAGCAAGAGCCGAGATGAACGGGTCTTCGTCATCCAGAAGCATTGGGCTACCCGCTTGCATTACGACTTCAGGCTGGAGCTGGAAGGAGCAATGAAAAGCTGGGCGGTTCCGAAGGGACCCAGTTTCGATCCCAACGACAAACGGATGGCAGTCCATGTGGAAGACCATCCGATTTCGTACAACCGGTTCGAGGGCCAGATTCCAGCGGGACAGTATGGCGCGGGAAAGGTCATCATCTGGGACAAGGGCTACTGGATTCCCCTGGAA
PROTEIN sequence
Length: 118
MSKADLLKIYRARRDFSKTTEPSGEDRGESKSRDERVFVIQKHWATRLHYDFRLELEGAMKSWAVPKGPSFDPNDKRMAVHVEDHPISYNRFEGQIPAGQYGAGKVIIWDKGYWIPLE