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SCNpilot_cont_1000_p_scaffold_7623_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 11008..11541

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 177.0
  • Bit_score: 303
  • Evalue 1.70e-79
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 295
  • Evalue 1.40e-77
Peptide deformylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNN3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 177.0
  • Bit_score: 303
  • Evalue 1.20e-79
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCGATTAAGCCCGTGTTGAGGATGGGTGATCCCCGGCTGCTGGACGTGTCTCGAGAGGTGGCGGAATTTGGCACATCGGAGATGGAGGCGCTGGTGCAGGACATGCATGATACGATGGCAGCCCTGGATGGCGCTGGACTCGCTGCTCCCCAGATCGGCGTCAGCCTTCAAGTCGTCATATTCGGCGTGAAACGCAATCCGCGTTATCCGGATGCCGAAGAGGTACCCTATACCGTCCTGGTAAATCCTGTGATTACGCCGCTGACGCAGGAAATGGAATCGGGATGGGAAGGTTGCCTCAGTGTTCCGGGGTTGCGAGGCATGGTGCCGCGTTACAGCAGAGTCCGATATACCGGCAAGGACCAGCATGGGGAAACGATAGATCGCAGCGTCGAGGGTTTCCACGCTCGCGTGGTGCAGCATGAATGCGATCATCTGCTCGGTATTTTATATCCGATGAGGATGACCGACTTTCGCACCTTCGGCTTTACCGATGTCCTGTTCCCGGATGGCGCGCCAATGGACGAGTAG
PROTEIN sequence
Length: 178
MSIKPVLRMGDPRLLDVSREVAEFGTSEMEALVQDMHDTMAALDGAGLAAPQIGVSLQVVIFGVKRNPRYPDAEEVPYTVLVNPVITPLTQEMESGWEGCLSVPGLRGMVPRYSRVRYTGKDQHGETIDRSVEGFHARVVQHECDHLLGILYPMRMTDFRTFGFTDVLFPDGAPMDE*