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SCNpilot_cont_1000_p_scaffold_7623_10

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(11570..12196)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 182.0
  • Bit_score: 294
  • Evalue 1.20e-76
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 171.0
  • Bit_score: 264
  • Evalue 2.40e-68
Shikimate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 182.0
  • Bit_score: 294
  • Evalue 8.90e-77

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGATGGAACCCTTCAACACGCCAGGAGCGTCTAGCTATCCAATACATACATTGTCCGGCGAAGTGCGGAGAAACATATTTCTGATAGGAATGATGGGGGCTGGCAAAACCACCATAGGTAAACTGCTGGCCCATTACCTGGATAAAACCTTTTTCGACTCGGATCGCGAAATACAGAAAAAAACCGGGGTAAGCATTTCCGTCATCTTTGAAATTGAAGGAGAGGCAGGTTTCCGCAAGCGGGAAACCGAGGTGCTGTCCGAGCTGGTGAGAGGCGAGAATATCGTGCTTTCAACAGGAGGCGGAGCGGTATTGAGTGCAGCAAACCGGGACCTGCTGGCTCGGCATGGCACCGTTATTTATTTACGCGCCACCATCGACGATCTGTGGCGACGAACCCGTCAGGACAAAAACAGGCCCCTGCTGCAAACCACGGATCCCAGAAAACGCCTTGTCGAACTTTATGCCCAACGCGATCCGCTGTATCGGGAAACAGCGCACATCATCGTAGAGAGCGGAAAACGCGGCGCGCGCCACCTGGCTCAATTATTGGCGCAGCAGATTGCGTGCTCCGCCATCAGGACGGACCAGGAAGAAGGCAATCCAGACGAGAAAACGGGCGCTTGA
PROTEIN sequence
Length: 209
MMEPFNTPGASSYPIHTLSGEVRRNIFLIGMMGAGKTTIGKLLAHYLDKTFFDSDREIQKKTGVSISVIFEIEGEAGFRKRETEVLSELVRGENIVLSTGGGAVLSAANRDLLARHGTVIYLRATIDDLWRRTRQDKNRPLLQTTDPRKRLVELYAQRDPLYRETAHIIVESGKRGARHLAQLLAQQIACSAIRTDQEEGNPDEKTGA*