ggKbase home page

SCNpilot_cont_1000_p_scaffold_8483_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(983..2383)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 466.0
  • Bit_score: 659
  • Evalue 4.30e-186
Membrane-bound lytic murein transglycosylase F n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 466.0
  • Bit_score: 659
  • Evalue 3.10e-186
  • rbh
putative transglycosylase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 464.0
  • Bit_score: 630
  • Evalue 3.70e-178
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCGAACGTTTTCCCTTCTGTTTTTTTTTATCGTCATCGGGCACAGCTTGCTGCTTTCTGGCTGCGACCCTTTCAAACGCGCCGTGCTGCCGCTCGACGAATCCGACGAGCTGGTGGTGCTTACCGTCAATAGTCCGGATACCTATTACGAGAATTCGGATGGGGGTCTTGCCGGGATGGAGTTTGATCTGGCTTCCGAGTTCGCCCGCCATCTTGGAAAAAAGGTCCGATTCAAGATTATCTCCCGGCTGGAACACGCCTTCGATCTGCTCCAGGATCAGCAGGCGCACTTTGCCGCCGGCTTGAGCATCGGCGATAAATATCGGCTATGGGCGCACTTCGGGCCGGTCTATCAGCGCATTCAACCCCAGGTGATTTTCAGTACCGATTCTCGACGGCCAAGAAGCATGCAACAGCTTGTGGAAAAAACTGTCGAGGTGGCCACCGGAACCACTCATATTGAATTGTTGAACCAGGCAAAACGCAGTGTTCCGGAGTTGCAATGGACGGAAGTGGATATCATGCCGGACGATCTTCTCTCGAAATTATCGGAAGGCAAAATCGATTATGCGGTGGTCGATTCGACGCAGATCGAACTGGCTAAAAACTTTTACCCCAACCTGGATGTCGCTTTCAATCTCGGTTCGGAAACTGGCAGGGCCTGGGCGTTTCCTCTTTATACTGAACGGGCGGTGCTCGCCACTGTGCAGCAATTCTTTGATCGGATCAGGCGGGATGGAACGCTGAAGCGCCTTCTCGATCGGTATTACGGCCACCACATCCAGCGCCTGGAACAGATGGATGTGAGCGGCATCCTGTCCAAGCGACGCACCCTGCTTCCAGATCTGCTGGAGTATTTTCATGAGGCCGAGGAATTAACGGGGATCGATTGGCGACTGATCGCGGCGCTTGGCTATCAGGAATCGCACTGGAATCGCCTCGCTGTTTCCCCCAACAACGTACGCGGCCTCATGATGCTGACTGAAATCACGGCCGACAGGATGAAGGTCACAGACCGGCTCGACTCGCGGCAAAGCATCCTGGGGGGGGCACGCTATCTGGCAAAGTTGAAAGACCGGTTGCCAACACGCATCACCGAGCCGGATCGTACCTGGATAGCGCTGGCGGCTTACAACCAGGGGCGCGGCCATGTGGAAGATGCGCGTATCCTGGCGCAACGCATGGGATTGAACCCCGATTCCTGGCTGGATCTGAAAACGACTCTGCCGCTATTGAGCCTCAGCAAGTACCACAGCACCCTGAAGCACGGTTTCGCTCGCGGCGGCGAGGCAGTAATCCTGACGGAATCGGTGCGTACTTACTATAAAATTCTGATGAAATACGAACCGCCCTATTCATGGGGCTTTCCAGTTGCGGATAAAATCGACCCGCTTTCGTGA
PROTEIN sequence
Length: 467
MRTFSLLFFFIVIGHSLLLSGCDPFKRAVLPLDESDELVVLTVNSPDTYYENSDGGLAGMEFDLASEFARHLGKKVRFKIISRLEHAFDLLQDQQAHFAAGLSIGDKYRLWAHFGPVYQRIQPQVIFSTDSRRPRSMQQLVEKTVEVATGTTHIELLNQAKRSVPELQWTEVDIMPDDLLSKLSEGKIDYAVVDSTQIELAKNFYPNLDVAFNLGSETGRAWAFPLYTERAVLATVQQFFDRIRRDGTLKRLLDRYYGHHIQRLEQMDVSGILSKRRTLLPDLLEYFHEAEELTGIDWRLIAALGYQESHWNRLAVSPNNVRGLMMLTEITADRMKVTDRLDSRQSILGGARYLAKLKDRLPTRITEPDRTWIALAAYNQGRGHVEDARILAQRMGLNPDSWLDLKTTLPLLSLSKYHSTLKHGFARGGEAVILTESVRTYYKILMKYEPPYSWGFPVADKIDPLS*