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SCNpilot_cont_1000_p_scaffold_11724_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(2544..3182)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7V5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 213.0
  • Bit_score: 310
  • Evalue 1.60e-81
  • rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930, ECO:0000313|EMBL:KIO48720.1}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 195.0
  • Bit_score: 312
  • Evalue 4.50e-82
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 213.0
  • Bit_score: 310
  • Evalue 5.00e-82
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAGCAAGGCTTTTACCAAAGAAACCGATCCGGACGATGATTCCAGCGTGGAGGAGGTTGGCAACGCCATTTCATCCCTGCCTTCGGGAACCCGGAACTATATCACTCCAGGGGGGCATGCAAGATTGATGGATGAGTTTCTCTGGCTGATGAACAGGGAGCGTCCCCAGGTCACGGCAACCGTATCCTGGGCCGCCTCCAATGGCGATCGCTCGGAGAATGGCGATTATATCTATGGCAAGAAGCGCCTGCGCGAAATCGACCGGCGCATTCGCTTTCTTACGCGGCGCCTGGATATCGCGGAAATAATCGATCCAGCCGCGCCAAGGGAAGACGAAACGCGAATTTTTTTCGGTGCAACGGTAAGATTCGCAAACCAGGCGGGCGAGGAAAAAACGGTTTCCATCGTAGGCGTGGATGAGATCGACACCGCCAGGGGCTATATCAGCTGGGTTTCGCCTGTCGCGCGCGCGCTGATCAAGGCGCGCGAAGGAGAGGTGGTGATGCTGCATGCGCCGGCGGGAATCGAAGAACTGGAAGTCCTGGAGGTCAAATACCGGCCAGTTCCAATGGCGCCATTCGCGCCACTGGAATCGCAATCCCATACCCATCCCGGCAAGCCGGCAGCTCCGGCATGA
PROTEIN sequence
Length: 213
MSKAFTKETDPDDDSSVEEVGNAISSLPSGTRNYITPGGHARLMDEFLWLMNRERPQVTATVSWAASNGDRSENGDYIYGKKRLREIDRRIRFLTRRLDIAEIIDPAAPREDETRIFFGATVRFANQAGEEKTVSIVGVDEIDTARGYISWVSPVARALIKAREGEVVMLHAPAGIEELEVLEVKYRPVPMAPFAPLESQSHTHPGKPAAPA*