ggKbase home page

SCNpilot_cont_1000_p_scaffold_10556_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(1546..3132)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Burkholderia sp. H160 RepID=B5WTK2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 517.0
  • Bit_score: 300
  • Evalue 2.40e-78
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48743.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 517.0
  • Bit_score: 482
  • Evalue 8.20e-133
baseplate J family protein similarity KEGG
DB: KEGG
  • Identity: 28.1
  • Coverage: 285.0
  • Bit_score: 60
  • Evalue 1.70e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
GTGAAGTCGATCCAGGCGCCGCTGGTGCGGGAACATGTCCTGTCGGAAGGGGAAATTGCCGCGCTGGTGGCGGCGCGTCTCGCGGCGCAAGGCTTTGCGCCAGCGGGAATGGATCCTCTGCAAGACGCCCTGGCAGCCATATTTACGCGCTACTGCGGAATCCTGGTCCAGCGTTTGAACCAAGTGCCTGAAAGCCATCACCAGGCCTTTATCGACATGCTCAATGCCACCCCCATGCCGGCGGCGCCCGCATGGGTGCCGCTGACGTTCAAGGCGGCCGGTTCCGTGCAGAATTTCTCTGCCGTCGTGGAGAAATTCACCCAGGTTTCCGCATCCGGAAAAGACGGGGCCGGGGCGGTGATGTTCGAAACGATGAAGGATCTGCCGCTGGCGCGGGCGGAACTGGTGCGTGCGGTGGCGGCAGATGGGCAAAGGCGGGTTCATGCCGACGTGAGCAGCATAATATCTCCCGGCGGCGCCGCGGGCTCCCCTTATCCTGTTTCATCCGAAGCAGTCCCGCTGGAGCGGGCGCTGCATATCGGGCAACCAGCAATTATCGGTGTGTCCGGCATCAACCGGCTTCGGCTGGGTATAGAACTGGAAGATGGGCCGGTCCAGCCAGCCCAACCTCAGGGGACACGTATCCAGTGGGGAATACGGGATGAAAAGGGCTTTTTTCCTCTCCAGCCCGAGGTGGACACGACCCGCGGCCTGTCCTGCAGCGGCGAGGTGGTTTTCAGTCCACCGGAAAAATGGCCGGGCTGGATGATCGGTGCGGAAACTCTCCCCTGGCTGACGTGCCGCCTGTACCAAAGCCGGAGTCTCCACGACGATGCCGCTTCCGGATCTGTTCCCGGTTCCGGTTCGGCGGGCAGCGGTCCCGCGGATTCCAGTCCCGTGGTTTCCATCAGGCGGATCGAGATCACCGGATGTTTCATTGCCGAGCATGAGAAAATGGATGGTGTTTTCCATGGCGGCATTCCACTCGATACCAGCATGGATTTTTTCCCTCTGGGCGAAAGGCCGCGCTTCGGAGAGGTGTTTTATGTCCGCTCCGAAAGCTTCGCCAGGGCGCGGACACACGCGGTCCTGGATATCCGGCTTACCAACCCAGCGGGCGCCCCGGATTCTCCCATTCCTGCCGTGAGCAGGGTGGGTAATCCGCAGTTGCGGTGGGAAGGCTATACCGAGCGAGGCTGGGTACGGCTGGAGTGTTCCGATGGGACGTTGTCGCTGACCCAGGATGGTAAAGTCGATTTGCTGATCCCGGACGATGCCGTTCCCGCCATGGTGAACGCGGCGAGAGGGGGGTGGGTGCGTGCGCGGCTGGCAAGCGGACACTATGCCGGCGATCAACCGGCAGCCGTGGGCGGCTGGCCTTCCGTGAATCCGCCTTCCATCGCCAAGCTATCGCTCTCCTCCTTTTCCGAGCTCGGGCCCTTTCCCCCCGAGCATCTGATCGTTGAGCGGTTCCCGGAGGCGGAGACATTCGATTGTCATGCGCAGGCCGCCCGGATGCCCTTCCTTTGCCACGCTGGCAGGTTCGCGGCGCATCAGGCTGGAACGACTGCACGGTCACGGACCTGA
PROTEIN sequence
Length: 529
VKSIQAPLVREHVLSEGEIAALVAARLAAQGFAPAGMDPLQDALAAIFTRYCGILVQRLNQVPESHHQAFIDMLNATPMPAAPAWVPLTFKAAGSVQNFSAVVEKFTQVSASGKDGAGAVMFETMKDLPLARAELVRAVAADGQRRVHADVSSIISPGGAAGSPYPVSSEAVPLERALHIGQPAIIGVSGINRLRLGIELEDGPVQPAQPQGTRIQWGIRDEKGFFPLQPEVDTTRGLSCSGEVVFSPPEKWPGWMIGAETLPWLTCRLYQSRSLHDDAASGSVPGSGSAGSGPADSSPVVSIRRIEITGCFIAEHEKMDGVFHGGIPLDTSMDFFPLGERPRFGEVFYVRSESFARARTHAVLDIRLTNPAGAPDSPIPAVSRVGNPQLRWEGYTERGWVRLECSDGTLSLTQDGKVDLLIPDDAVPAMVNAARGGWVRARLASGHYAGDQPAAVGGWPSVNPPSIAKLSLSSFSELGPFPPEHLIVERFPEAETFDCHAQAARMPFLCHAGRFAAHQAGTTARSRT*