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SCNpilot_cont_1000_p_scaffold_11894_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 2809..3981

Top 3 Functional Annotations

Value Algorithm Source
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 394.0
  • Bit_score: 679
  • Evalue 3.40e-192
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 393.0
  • Bit_score: 659
  • Evalue 8.10e-187
  • rbh
Chorismate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLJ7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 394.0
  • Bit_score: 679
  • Evalue 2.40e-192
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GTGTCTGGAAATACGCTCGGCAAGCTTTTTTGCGTGACTTCTTTCGGCGAATCCCACGGCCCGGCTATCGGCTGCGTGGTCGACGGTTGCCCTCCGGGGATGGAATTGTCCGCCGAAGATATCCAGCAGGACCTGGACCGGCGCCGTCCGGGCACTTCGCGTTATGTAACCCAGCGGCGCGAACCGGACACGGTGGAAATCCTTTCCGGGGTATTTGAAGGCCGAACCACTGGCACGCCCATTGCGCTGTTGATCCGCAACCACGATCAGCGGAGCCAGGATTACAGCAAGATCATGGATACGTTCCGGCCGGGGCATGCAGACTATGTCTACTGGCAGAAGTACGGGATACGCGACTACCGCGGCGGCGGCCGGTCCTCCGCGAGGGAAACGGCGGTGCGGGTTGCGGCAGGCGCCATTGCCCGAAAATGGCTGCTGGAAAATCATGGCGTGCGGATACGCGGCTACATGGCGCAACTTGGGCCGATAGCGGCGCCATTCGGGCAGTGGGCCGAGGTCAGCCGGAACCCGTTCTTCGCGGCGGATGCTGCTATCGTGCCTGTCCTGGAAGAATTCATGGACAAGCTGCGGAAGTCAGGCGAGTCTGTCGGGGCGAAGATCACCGCAGTGGCGGAGGGCGTGCCCGTAGGCTGGGGCGAGCCGGTGTATGACCGGCTGGACGCGGAGATCGCCTACGCGATGATGAGCATCAATGCAGTCAAGGGTGTCGAGATCGGCGCGGGTTTTGCCGCTGTCGCGCAAAAAGGCACCGAGCATTCGGATGAGATCACGCCGGAAGGATTTCTGAGCAATAATGCGGGAGGCATCCTCGGCGGCATTTCCACGGGGCAGGACATCGTGGTGAATATCGCTGTCAAGCCGACTTCCAGCATCCGGCTGGGCCGCCGGTCCGTAGACAAGAGCGGCAGGCCGGTAGTGGTCGAGACCCATGGCAGGCATGATCCCTGCGTCGGCATTCGTGCAACGCCCATCGCCGAGGCGATGCTGGCGCTGGTGCTGATGGATCATGCCCTGCGCCACCGGGCACAAAATGCAGATGTCTCCTGTCCGACGCCAAAAATCCCCGCCAGTGTTCCAGCGAACGTTTTCATTCCATTGAGTGGAAACCGGAAGGCGGGTCTGACCGAGGACCCGGAACCGGACGAAGCCTGA
PROTEIN sequence
Length: 391
VSGNTLGKLFCVTSFGESHGPAIGCVVDGCPPGMELSAEDIQQDLDRRRPGTSRYVTQRREPDTVEILSGVFEGRTTGTPIALLIRNHDQRSQDYSKIMDTFRPGHADYVYWQKYGIRDYRGGGRSSARETAVRVAAGAIARKWLLENHGVRIRGYMAQLGPIAAPFGQWAEVSRNPFFAADAAIVPVLEEFMDKLRKSGESVGAKITAVAEGVPVGWGEPVYDRLDAEIAYAMMSINAVKGVEIGAGFAAVAQKGTEHSDEITPEGFLSNNAGGILGGISTGQDIVVNIAVKPTSSIRLGRRSVDKSGRPVVVETHGRHDPCVGIRATPIAEAMLALVLMDHALRHRAQNADVSCPTPKIPASVPANVFIPLSGNRKAGLTEDPEPDEA*