ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_1000_p_scaffold_759_29

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 26564..27604

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2H0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 343.0
  • Bit_score: 556
  • Evalue 1.60e-155
  • rbh
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 343.0
  • Bit_score: 556
  • Evalue 5.00e-156
  • rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEM51600.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 343.0
  • Bit_score: 556
  • Evalue 2.20e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAAGCGCCGCGCGCTGTTGCAGGCGCTGGCTCTGGCGCCGCTGCTGGCGGCGGGCAACGGCCCGCTGCGCGCGATGCCGACACAGCGCGTGCTGCGCCTGGGGGAGCCCACGGGCGTCCCCGCACGGGTGTTTGCCGCCGGCGCTCCGGCGGCCGTGCTGATCGCCGCGCTGGCGCCGGAACGCCTGTTGGGCTGGCCGATGCAGATGGCGCCCGAGGCGCTGGCGCTGCTGCCCGCGCCGCTGCGCGCGCGTCCGGTGATTGGCCGGCTGGCGGGGCGTGGCAGCACGGTGAGCCTGGAACGGCTGCTGGCGATGCAGCCGGACCTGGTGCTGGATGCCGGCGATTTCGACGCCAACTACCGCTCCTCCGCCGAACGGGTCTGGCAGCAGACCGGCATTCCCATCGAACTGGTGGCCGGGCGCCTGCCCGACCACCCGGCCCAACTGCGGCACGTCGGCCGGCGGCTCGGCGTGGCCGCGCGCGGCGAAGCGCTGGCGCAGGCCGCCGAGGCGCAGCTGGCGCTGGTCCGCGAGGTACTGGCCACGCGCGCGCCCGACGCCCGGCCGACGGTCTACTACGGCCGCGGCGGCGACGGGCTGGAGAGCGGGCTTGCCGGTTCGATCAATACCGAGGTCATCGAGTTCTGCGGCGGCCGCAACGTCGCCGCCGCCGTCGGCAGCGGCGGGCTGGCACGGGTATCGCTGGAACAACTGCTGGCGTGGGACCCGGACGTGATCCTGACCCAGGATGCGGCATTCGCCGCCAGCGCATCGCAGGACCCGCGCTGGCGCAGCCTGCGCGCGGTGCGCAGCGGACGCCTGCACTGCGCGCCGACCCTGCCGTTCGGCTGGCTCGACGGCCCGCCAGGCATCAACCGCCTGCCGGGGCTGGCATGGCTGCTGGCACGGCTGCACCCCGGCGCTACCCCGGCGCTGGCGCCGGCCGCGCTGCGGGCGCGCATCGACGCACTGCACCGTCTGCTGTGGGGCTCGCGCTTGCCGGCCGGCATCGCCGATGCGCTGGAGCCTGGCCGGTGA
PROTEIN sequence
Length: 347
MKRRALLQALALAPLLAAGNGPLRAMPTQRVLRLGEPTGVPARVFAAGAPAAVLIAALAPERLLGWPMQMAPEALALLPAPLRARPVIGRLAGRGSTVSLERLLAMQPDLVLDAGDFDANYRSSAERVWQQTGIPIELVAGRLPDHPAQLRHVGRRLGVAARGEALAQAAEAQLALVREVLATRAPDARPTVYYGRGGDGLESGLAGSINTEVIEFCGGRNVAAAVGSGGLARVSLEQLLAWDPDVILTQDAAFAASASQDPRWRSLRAVRSGRLHCAPTLPFGWLDGPPGINRLPGLAWLLARLHPGATPALAPAALRARIDALHRLLWGSRLPAGIADALEPGR*