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SCNpilot_cont_1000_p_scaffold_1152_16

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(16657..18894)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor {ECO:0000313|EMBL:KGO99170.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 753.0
  • Bit_score: 1103
  • Evalue 0.0
TonB-dependent receptor id=2528236 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 761.0
  • Bit_score: 931
  • Evalue 6.70e-268
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 772.0
  • Bit_score: 569
  • Evalue 1.60e-159

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
ATGAAACGCAAGTATCTGAGCATGGCCGTGGGCTGTGCACTGCTGGCCCCGGCCGCGTTCGTGCAGGCCGAGGAACAGCAGCCGGCCGGCCACCAGCAGGCCACCCAGCTGGACGAAGTCACCGTGACCGCGCGCCGTCGCGCCGAGTCCATCCAGGACGTGCCGGTGGCGGTGTCGGCCTTCGGCGAGGAGCAGATCAAGGATCTGCAGGCCTCGACCGTGGAGGGGCTGCAGGGGGCGGTGCCGAACATGAACATCGCCCAGGGCCGCGGTTCGGCCAACAGCGTCAACGTGTTCATCCGTGGCATCGGCCAGCCGGATGCGCTGCAGACGTTCGATCCGGGCGTGGGCATGTACGTGGACGACGTCTACTACTCGCGCATCAACGGCGCGCTGTTCTCGCTGTTCGACATCCAGCAGCTGGAAGTGCTGCGCGGCCCGCAGGGCACCCTGTACGGCAAGAACTCCACCGGCGGCGCGATCAAGCTGACCACCAAGAATCCGTTCGACAACGAGGGCGGCGCGGTGGAAGTCACCGCCGGCGACTACGGCCGCCTGGAAGGCCGCTTCTACGTCTCGGGCAAGCTCAGCGACACCATCGCCGCCAGCATCGCCGGTGCCAAGATCACCAACGACGGTTACGTCAAGGACGCCGAGACCGGCAAGCGCTACAACGACGACGACACCGAGGCGCTGCGCTTCAAGATGGCGTTCAATCCGACCGACAGCTTCCGTGCCACGCTGTCGCTGGACACCACCAAGCAGGACGCGGCGCTGACCCTGGGCCGGCCGATGGCCAACCTGCGCCAGACCAGCCTCGCGCCGGCCGGCGTGATCGTGCTCAAGCCGGGCGAGACCGGCGAATGGAACCGTCGCGCCCTGACCTCGTTCAAGAATGGCGAGGGCCAGTACCTGAAGCACTCCGGCGCGTCGCTGGCGATGGACTGGGACATCAACGCGCAGTGGACGCTCAAGAGCATCAGCTCCTACCGCAAGCTCAAGACCAAGTCGTACATCGACATCGATGCCTCCGAGTACGAACTGGGCGACGTGCTGGTCGCGCTGAACCAGGACCAGAAGAGCCAGGAGTTCCAGCTGCATTACGACAACGGCTCCAACCTGCACGCCACCTTCGGCGCGTACTACATGAAGGAGAACGTGCCGTCCTACCAGGAGGCCTATGCCGACGACCTGTTCTCGTTCCTGGGGGCGAAGGTGCCGTTCCTGCGCACCATCAACGATGACCTGACCACCACCTCCAACGCCGCCTTCGCCCACCTCAACTGGGAGTTCGTGCCGAGCTGGACCGTGGCCGCGGGCGTGCGCTGGACCAAGGACAAGAAGGACTACGCCCGTTCCACCAGCACCTTCTGGGGCGCGCCGTTCACCGCCCTGAACGAAACCGTGGCCTTTGCCGCCAATGCCTCGTGGACCGCGGTCACGCCGTCGATCAGCCTGCAGAAGGCCTTCGGCGACAACCTGATGGGCTACGTGTCGGCCAACCGCGGCTTCAAGTCCGGCGGCTTCAACGGCCGCGCCAACACCAAGTACGACACCCAGCACGCCAAATTCGACCCGGAATACGTGTGGACCTACGAGCTCGGCCTGAAGGGCAGCTCGGCCGACCGCCGCTTCCGCGGCAGCGCGGCGGCGTTCTACAGCAACTACAGCGACTTCCAGGCGCGCGTCTCGCAGGACGTGGGCACCTTCCCGGTGCTGAACGCGGCCAAGCTCAACATCAAGGGCATCGAGCTCGAGGGCAGTGCGCTGCTGGGCGAGGCCACCACGCTGAGCGCGCAGATCGGCTGGATGGACGCCAAGTACGACAAGTTCGAGGACTTCCGCCTGGATCCGTCGTACCCGGGCTTCGATCCGAACGTGAACCATGACAACGTGCCGTTCTCGCCGGACTGGACCGCGCGCGTGGCCCTGCAGCACGTGTTCGCGCTGGGCGACAACGGCAACCTGACCTTCGGCGGCGATGTCTCCTACCGCGGCAAGACCTGGCTGAGCGTGGACAACCGTGCCGTGCTGAGCCAGGACGCCTACACCCTGCTGGGCGTCTACGGCGTGTGGGATTCGCCGCAGATGGCCTGGCAGGTGCGTGCCGGCGTGCGCAACCTGACCGACAAGGAATACAAGACCGAAGGCCAGGAGTTCGCCAGCGTGGGCAACATCCAGACCGCCTACTACGGCCTGCCGCGCAACTGGTACATGTCGCTGCGCTACAACTTCTGA
PROTEIN sequence
Length: 746
MKRKYLSMAVGCALLAPAAFVQAEEQQPAGHQQATQLDEVTVTARRRAESIQDVPVAVSAFGEEQIKDLQASTVEGLQGAVPNMNIAQGRGSANSVNVFIRGIGQPDALQTFDPGVGMYVDDVYYSRINGALFSLFDIQQLEVLRGPQGTLYGKNSTGGAIKLTTKNPFDNEGGAVEVTAGDYGRLEGRFYVSGKLSDTIAASIAGAKITNDGYVKDAETGKRYNDDDTEALRFKMAFNPTDSFRATLSLDTTKQDAALTLGRPMANLRQTSLAPAGVIVLKPGETGEWNRRALTSFKNGEGQYLKHSGASLAMDWDINAQWTLKSISSYRKLKTKSYIDIDASEYELGDVLVALNQDQKSQEFQLHYDNGSNLHATFGAYYMKENVPSYQEAYADDLFSFLGAKVPFLRTINDDLTTTSNAAFAHLNWEFVPSWTVAAGVRWTKDKKDYARSTSTFWGAPFTALNETVAFAANASWTAVTPSISLQKAFGDNLMGYVSANRGFKSGGFNGRANTKYDTQHAKFDPEYVWTYELGLKGSSADRRFRGSAAAFYSNYSDFQARVSQDVGTFPVLNAAKLNIKGIELEGSALLGEATTLSAQIGWMDAKYDKFEDFRLDPSYPGFDPNVNHDNVPFSPDWTARVALQHVFALGDNGNLTFGGDVSYRGKTWLSVDNRAVLSQDAYTLLGVYGVWDSPQMAWQVRAGVRNLTDKEYKTEGQEFASVGNIQTAYYGLPRNWYMSLRYNF*