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SCNpilot_cont_1000_p_scaffold_3969_10

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 8751..9593

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 271.0
  • Bit_score: 346
  • Evalue 2.80e-92
pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 284.0
  • Bit_score: 337
  • Evalue 3.90e-90
  • rbh
pseudouridylate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000308A8CC similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 282.0
  • Bit_score: 344
  • Evalue 7.70e-92
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGTCGCGCAGGAATTACCCTGATGCCCGCCCTGCCAGACAGGGCGGGCATTTTGCTGCGTCCCCCGGTCCCCGTGCCAAGCACGCCGGCGCGACGCAGGCGGCGCCGCGGCATGGCCTGGCGCGCGTGCTGTCGAAGGCGGGCGTGTGCTCGCGCGCCGAGGCCGCGCGCCGCGTGCTCGCCGGCCGGGTCGGCGTGGACGGCCGCGTGGTGCGCGACCCGGAATTTCCGGTGGTTCCCGGGCGCCAGCGGGTGACCATGGACGGCCAGCCCCTCGTGGCGGCGCAACGCCTCTACCTGGCCCTGAACAAGCCGCGGGGCCTGGTCACCAGCGTCCGCGACGAGCAGGGCCGGGATACCGTCTACCGATGTTTCGAAGGTGCGGGCATGCCATGGCTGGCGCCGGTCGGACGGCTGGACAAGGCCAGCGAGGGCCTGCTGTTCTTCAGCAACGACCCGGAATGGGCCGCCAGGCTGACCGACCCGGCGACCGGGCCATTGAAGACCTATCGCGTGCAGATCGACGGCGTGCCCGACGCGGCGCAGCTGGCGCGCATGCATGACGGGGTCGAGGACGCCGGTGAACACCTGGCCGTGCATTCGGTCGCGGTGCTGCGCCAGAGCGAGCGCACCGCATGGCTGGAGATCGTGCTGGACGAGGGCCGCAACCGGCATATCCGGCGCCTGCTGCAGGTAGTGGGATTCGAGGTGCTGCGCCTGGTGCGGGTGGCGATCGGGCCGGTCCAGCTGGGCGCACTGGCCAAGGGGCAGTGGCGCATGCTGGGTGAGGAGGAGCTGGAACGCCTGCTCGCCCATTCAGGTGAATCATCTGCCAATTCATGA
PROTEIN sequence
Length: 281
MSRRNYPDARPARQGGHFAASPGPRAKHAGATQAAPRHGLARVLSKAGVCSRAEAARRVLAGRVGVDGRVVRDPEFPVVPGRQRVTMDGQPLVAAQRLYLALNKPRGLVTSVRDEQGRDTVYRCFEGAGMPWLAPVGRLDKASEGLLFFSNDPEWAARLTDPATGPLKTYRVQIDGVPDAAQLARMHDGVEDAGEHLAVHSVAVLRQSERTAWLEIVLDEGRNRHIRRLLQVVGFEVLRLVRVAIGPVQLGALAKGQWRMLGEEELERLLAHSGESSANS*