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SCNpilot_cont_1000_p_scaffold_16107_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(1729..2622)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037A1951 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 289.0
  • Bit_score: 406
  • Evalue 2.30e-110
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:AJC45332.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 295.0
  • Bit_score: 408
  • Evalue 8.40e-111
trpI; TrpI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 295.0
  • Bit_score: 395
  • Evalue 1.30e-107
  • rbh

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAAAGACGATCACGCCCTGCCCTCGCTCAACGCCCTGCGTGCCTTCGAGGCCGCCGCCCGCCTGCGCAGTGTCAGCCTTGCCGCTGCGGAGCTGCACGTGACCCATGGCGCGGTCAGCCGCCAGGTGCGGGCCCTGGAGGAGGAACTGGGAGTCCCCCTGATCGAACGCGACGGCCGCGGCATCCGCCCCACCGCCGCCGGCAGGCGCCTGCAGGAAGCGGCCTCGGGGGCGTTCTCGCAGCTGCGCGACTGCGTGGCCGCCCTGCGCCGGGGCAAACGCAACGATGCCTTCGTGCTCGGCTGCCCGGGCAGCGTGCTGGCGCGCTGGATGATCCCGCGCCTGCAGCAACTGCAACAGGACCTGCCGGGCCTGACCCTGCACCTGGCCGCGCAGGATGGCGATTTCGCGCCACGACTGGCCGGGCTCGATGCCGCCCTGCTGCTCGGCCAGGCGCCGTGGCCGGCCGGCTGGACCGTGCACGGCCTGGGCAGCGAGCGCATCGGCCCGGTGTTCAGCCCGTCCATGCATGGCGCGCAGCGGCTCGTGCACCAGCCGCCGGAGGCGCTGTTCGAGCACGCGCTGCTGCACACCCGTTCGCGCCCCCAGGCCTGGCCCACCTGGGCCACGCTCAACGACCTGGACCCGGCGGCGCTGCGCCAGGGCACTGGCTTCGAACACCTGTACTACCTGCTCGAAGCGGCGGTCGCCGGACTCGGCATCGCCATCGCCCCCGAGCCACTGGTGGCCGATGACCTGGTCAACGGCCGCCTGGTCGCGCCGTGGGGGTTCGTCGACACCGAAGGGCAATGGGCGCTGTGTACCGCCGGCGGCGACCGGCATCCGCGGATCGAGGCGCTGGCGGACTGGCTGCGGCGGCAGTTGGCCGCATAG
PROTEIN sequence
Length: 298
MKDDHALPSLNALRAFEAAARLRSVSLAAAELHVTHGAVSRQVRALEEELGVPLIERDGRGIRPTAAGRRLQEAASGAFSQLRDCVAALRRGKRNDAFVLGCPGSVLARWMIPRLQQLQQDLPGLTLHLAAQDGDFAPRLAGLDAALLLGQAPWPAGWTVHGLGSERIGPVFSPSMHGAQRLVHQPPEALFEHALLHTRSRPQAWPTWATLNDLDPAALRQGTGFEHLYYLLEAAVAGLGIAIAPEPLVADDLVNGRLVAPWGFVDTEGQWALCTAGGDRHPRIEALADWLRRQLAA*