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SCNpilot_cont_1000_p_scaffold_16399_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(2365..3180)

Top 3 Functional Annotations

Value Algorithm Source
trpB; tryptophan synthase beta chain protein (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 271.0
  • Bit_score: 508
  • Evalue 1.60e-141
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 271.0
  • Bit_score: 508
  • Evalue 5.50e-141
Tryptophan synthase beta chain n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCP6_XANAP similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 271.0
  • Bit_score: 508
  • Evalue 5.10e-141

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GCGCGCCTGGGCCTGGAGTGCGTGGTCTACATGGGCGCTACCGACATCGAGCGGCAGAAGATCAACGTCTACCGGATGAAGCTGCTGGGCGCCACGGTGGTGCCGGTGAGCAGCGGCTCGGCCACCCTCAAGGACGCGCTCAACGAGGCGATGCGCGACTGGGTGACCAACGTGCGCGACACCTTCTACATCATCGGCACCGTCGCCGGCCCGGACCCGTATCCACGCATGGTGCGCGACTTCAACGCCATCGTCGGGCGCGAGGCGCGCGCGCAGATGCTGGAGGACTACGGCCGCCTGCCCGATGCGATCACCGCCTGCGTCGGCGGCGGTTCCAACGCGATCGGCCTGTTCCATGCTTTCCTCAACGACCGCGAGGTGAAGATCTACGGCGCCGAAGCGGCCGGCGACGGCATCGCCAGCGGGCGCCATGCGGCCTCCATCTCGGCCGGTCGCCCCGGCGTGCTGCATGGCAACCGCACGTATGTCCTGTGCGACGACGACGGCCAGATCACCGAGACCCACTCCATCTCCGCCGGCCTGGATTACCCGGGCGTCGGCCCGGAACATGCCTTCCTGGCCGACAGCGGCCGCGCGCACTACGTCGGCATCACCGACGAGGAGGCACTGGCGGCATTCCATCGCCTGACCCGTACCGAGGGCATCCTGCCGGCACTGGAATCCAGCCACGCGGTGGCGCAGGCGATCAAGCTGGCGCGCGAGCTGCCCCGGGATGCGCTGGTGCTGTGCAACCTGTCCGGTCGCGGCGACAAGGACGTGCATACCATTGCCGCGCGCGAAGGGCTGTCGCTGTGA
PROTEIN sequence
Length: 272
ARLGLECVVYMGATDIERQKINVYRMKLLGATVVPVSSGSATLKDALNEAMRDWVTNVRDTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMLEDYGRLPDAITACVGGGSNAIGLFHAFLNDREVKIYGAEAAGDGIASGRHAASISAGRPGVLHGNRTYVLCDDDGQITETHSISAGLDYPGVGPEHAFLADSGRAHYVGITDEEALAAFHRLTRTEGILPALESSHAVAQAIKLARELPRDALVLCNLSGRGDKDVHTIAAREGLSL*