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SCNpilot_cont_1000_p_scaffold_22829_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 2138..2485

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SW61_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 116.0
  • Bit_score: 201
  • Evalue 5.70e-49
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:CCP40325.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 116.0
  • Bit_score: 201
  • Evalue 8.00e-49
Tfp pilus assembly protein; K02662 type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 110.0
  • Bit_score: 193
  • Evalue 3.70e-47

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCGCGGGCGCAACAAGTGCGTCCAAGTGCCCGTCGGCAGGGGAGAAACCGTGGGGCTTATCCCAAAGAGTCAGCCACCGATCATCGGTGTTGACATCAGCTCGACTGCGGTGAAGCTGCTTCAGCTCGCCCGCAGCGGCAATCGCTTTCGCGTGGAACATTACGCCGTGGAACCACTTCCGCCGAATGCGGTGGTGGAAAAGAACATCGTCGAGGTCGAGGCGGTCGGCGAGGCCATACGTCGTGCCGTGGCGCGCTCGGGAACCCGCGCCAAGGGCGCGGCCGCCGCGGTCGCCGGTTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGACCTGGACGAG
PROTEIN sequence
Length: 116
MRGRNKCVQVPVGRGETVGLIPKSQPPIIGVDISSTAVKLLQLARSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVARSGTRAKGAAAAVAGSAVITKVIPMPADLDE