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SCNpilot_cont_1000_p_scaffold_30775_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1294..1992

Top 3 Functional Annotations

Value Algorithm Source
Probable 30S ribosomal protein S1 n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M1N7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 233.0
  • Bit_score: 449
  • Evalue 1.80e-123
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 233.0
  • Bit_score: 449
  • Evalue 5.80e-124
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 233.0
  • Bit_score: 449
  • Evalue 2.60e-123

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGACCGAATCATTTGCAGAACTGTTTGAAGCCAGCCAGGCCAATCTGGCCAAGCTGAAGCCGGGCGCCATCGTCGTCGGCACCGTCGTCGACGTCCGCGGCGACGTGGTGGTGATCAACGCCGGTCTGAAGTCCGAAGGCATCGTGCCGATCGAACAGTTCCGTAACGACGCTGGCGAAATCGACGTGGGCGTGGGCGACCAGGTGAAGGTCGCGCTCGACTCGATCGAGAACGGCTTCGGCGAAACCGTCCTGTCGCGCGAGAAGGCCAAGCGCGCCATGGTGTGGGACGAGCTGGAAGAAGCGTTGGAGAAGAACGAGACCATCACCGGCCGCATCAGCGGCAAGGTCAAGGGTGGTTTCACCGTCGACATCAAGGATGTCCGCGCGTTCCTGCCGGGTTCGCTGGTCGATGTGCGCCCGGTGCGCGACCCGGCCTACCTGGAAGGCAAGGAGCTGGAGTTCAAGCTCATCAAGCTCGACCGCAAGCGCAACAACGTGGTCGTTTCCCGCCGTGCGGTCGTCGAGAGCGAGCACTCGGAAGAGCGCGAGCAGCTGATGGACAAGCTGCAGGAAGGCGCGATCCTGAAGGGTGTCGTCAAGAACCTGACCGACTACGGCGCGTTCGTGGACCTGGGTGGCATCGACGGCCTGCTGCACATCACCGACATGGCGTGGAAGCGCGTGCGCCATCCGTCC
PROTEIN sequence
Length: 233
MTESFAELFEASQANLAKLKPGAIVVGTVVDVRGDVVVINAGLKSEGIVPIEQFRNDAGEIDVGVGDQVKVALDSIENGFGETVLSREKAKRAMVWDELEEALEKNETITGRISGKVKGGFTVDIKDVRAFLPGSLVDVRPVRDPAYLEGKELEFKLIKLDRKRNNVVVSRRAVVESEHSEEREQLMDKLQEGAILKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPS