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SCNpilot_cont_1000_p_scaffold_1496_18

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 13 / 38
Location: comp(16143..16487)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UEW2_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 227
  • Evalue 9.60e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 227
  • Evalue 3.00e-57
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 227
  • Evalue 1.30e-56

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Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGCGAATCGATCCCTGCGTGGCATGCGCATCGGGTCCCACAGCATGGAGACCGAGGACGGCGTCGACTTCGCCCCTCGGCTCCAGGCGTACTACGACTGCCCCAACGGGCACACGATCATCCTGCCGTTCTCGGTCGAGGCCGACGTCCCGGTGGTCTGGGAGTGCCGCTGCGGCGCCGAGGCGATCCTCCGTGACGCGTCGAAGCCCGAGGCGAAGGCGGGCAAGCCGCCGCGCACGCACTGGGACATGCTGCTCGAGCGCCGCACGATCGGCGAGCTCGAGGAGCTGCTCGACGAGCGGCTCGACCTGCTGCGCGCGGGCAAGCTGCGCCGCAGCGCCTGA
PROTEIN sequence
Length: 115
MANRSLRGMRIGSHSMETEDGVDFAPRLQAYYDCPNGHTIILPFSVEADVPVVWECRCGAEAILRDASKPEAKAGKPPRTHWDMLLERRTIGELEELLDERLDLLRAGKLRRSA*