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SCNpilot_cont_1000_p_scaffold_2377_26

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 13 / 38
Location: comp(22816..24063)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Actinopolymorpha alba RepID=UPI000376A807 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 409.0
  • Bit_score: 630
  • Evalue 1.00e-177
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 406.0
  • Bit_score: 626
  • Evalue 8.10e-177
  • rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACQ80344.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 406.0
  • Bit_score: 626
  • Evalue 3.60e-176

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Taxonomy

Beutenbergia cavernae → Beutenbergia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
GTGACGGAGCTCGTCGACGAGGCGATCACCCGGGCCCACCGATCGGAGTGGGCCCGGGTGGTCGCCTCCCTGGCCAGGCGCTTCGGCGACCTCGACGTCGCCGAGGAGGCGGCCGCGGAGGCGTTCGCCACCGCGGTCGAGCGCTGGCCGCGCGACGGCGTCCCGCCCAACCCCGGCGCCTGGCTGACGACGACCGGGGCCCGCAAGGCGATCGACCGCCTCCGCCGCGAGTCGCACCGCGACGAGAAGCACCAGGAGGCCGCGTTGCTGTACGACGAACCTCCCGAACCGCTCGGAGCCGTCGACGACGACCGCCTGCGGCTGGTGTTCACGTGCTGCCACCCCGCGCTCTCGTCGGACGCCCGGGTGGCGCTGACCCTGCGGATGGTGGGCGGGCTGACCGTCCCGGAGATCGCCCGTGCCTTCCTGGTGCAGGAGGTGGCGATGGGCCAGCGCATCACCCGCGCCAAGGCCAAGATCAAGGCCGCGCACATCCCCTACCGGGTCCCCCTCACCGAGGACCTGCCGGGCCGGCTCGACGCGGTGCTGACCGTGCTGTTCCTCGTGTTCAACGAGGGGTACCTCGCCACCGGTGCGGGGACCGACCCGGTCCGCGCCGACCTCACCGCCGAGGCGATCCGCCTGGCCCGCCTGGTGCACGAGCTCATGCCCGACGACGGCGAGGTCACCGGGCTGCTCGCCCTCATGCTCCTGACGGAGGCCCGCCGCGCCGCCCGCGTCTCGGCGACGGGCGAGCTGATCACGCTCGACGAGCAGGACCGCGGCGCCTGGGACCGCGCCCTGATCGAGGAGGGTCACGCCCTGGTCCGGTCCCGGCTGGCCGCCGTGGCCGCGGGCGGCCCGCCGCCCGGCCGCTACCAGCTCCTCGCCGCGGTCAACGCCGTCCACACCGACGGCCGCGACGCGCGGGACACGGACTGGTCGCAGGTCGTGGCCCTCTACGACCGGCTGGTCCGCCTGGACCCCTCCCCCGTGGTCGCCCTCAACCGCGCGGTCGCCGTCGCGGAGGTCGACGGGCCCGACGTCGCGCTCGCCCTGATCGACCGCCTGCCGCTGGACGGCTACCACGCCTTCCACGCCGCCCGCGCCGACCTGCTGCGCCGCCTGGGCCGCAGCGGGGAGGCGCGGCTCGCCTACGACCGGGCCGTCGCCCTGGCCGGCAACACGGCCGAGGCGGCCTACCTCAGCCGCCGCCGCGGCCAGCTCAGGTCGGCGGGCGGCACGTAG
PROTEIN sequence
Length: 416
VTELVDEAITRAHRSEWARVVASLARRFGDLDVAEEAAAEAFATAVERWPRDGVPPNPGAWLTTTGARKAIDRLRRESHRDEKHQEAALLYDEPPEPLGAVDDDRLRLVFTCCHPALSSDARVALTLRMVGGLTVPEIARAFLVQEVAMGQRITRAKAKIKAAHIPYRVPLTEDLPGRLDAVLTVLFLVFNEGYLATGAGTDPVRADLTAEAIRLARLVHELMPDDGEVTGLLALMLLTEARRAARVSATGELITLDEQDRGAWDRALIEEGHALVRSRLAAVAAGGPPPGRYQLLAAVNAVHTDGRDARDTDWSQVVALYDRLVRLDPSPVVALNRAVAVAEVDGPDVALALIDRLPLDGYHAFHAARADLLRRLGRSGEARLAYDRAVALAGNTAEAAYLSRRRGQLRSAGGT*