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SCNpilot_cont_1000_p_scaffold_6652_5

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 13 / 38
Location: comp(3622..4101)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003771119 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 118
  • Evalue 8.70e-24
DNA-binding protein HU {ECO:0000313|EMBL:ELP61469.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 167.0
  • Bit_score: 114
  • Evalue 1.40e-22
putative histone-like DNA binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 173.0
  • Bit_score: 109
  • Evalue 7.50e-22

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Taxonomy

Streptomyces turgidiscabies → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGTCAGCAAGTCGCAGCTCGCCCAGCGCATCGCGGCGCGGGGCGCCACGCCGGCCCAGGCCGCCCACGCGGTCGACGCCGTGCTCGGGGAGATCACCGCCGCCCTGGCGGCGGGGGAGAAGGTGACGCTCGTCGGCTTCGGCTCGTTCGAGCCCGTCGCCCGCGGCGCCCGCACGGCGCGCAACCCCCGCACCGGCGAGACGGTTCCGGTGGCCGCTACGACGGTGCCGCGGTTCCACCCCGGTGCCGGGCTCCGCACCGCGGTGGACGGCGGCGGGACGTCGCTGCGCCCCGTCGGCTCGCTCGCGGACGGCTACGCGTCGCTCGTCGTGCCCGAGGCGCCGGCGAAGGCGGCGCGGCCGGCCAAGCCGGCGAAGCCCGCGCCCAAGAAGGTCGCCAAGGCCGCCAAGCCGGCGGCGAAGGACGACAAGCACAAGGGCAAGGACGCCAAGGGCAAGAAGTCGGGCAAGAAGAAGTAG
PROTEIN sequence
Length: 160
MVSKSQLAQRIAARGATPAQAAHAVDAVLGEITAALAAGEKVTLVGFGSFEPVARGARTARNPRTGETVPVAATTVPRFHPGAGLRTAVDGGGTSLRPVGSLADGYASLVVPEAPAKAARPAKPAKPAPKKVAKAAKPAAKDDKHKGKDAKGKKSGKKK*