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SCNpilot_cont_1000_p_scaffold_5192_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 8 / 38
Location: comp(4614..5153)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1Q0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 193.0
  • Bit_score: 93
  • Evalue 2.60e-16
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 161.0
  • Bit_score: 96
  • Evalue 5.60e-17
OstA-like protein; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 205.0
  • Bit_score: 78
  • Evalue 2.10e-12

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Taxonomy

Paracoccus sp. 361 → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGAACGCGCGCCGTCTTCCTTTTCTTTTCGCTGTGGCGTTCGCGCTCATACCCGCAACCGGATATGCCGCCACGGCCGTCAATCTCGGCAAGCACAATGCCGATGCACCGATTCAGGTTTCGGCGGACAGCTTCATTGCCGACATCAACGCCAAAACCGGCACCTACACCGGCAATGTCGTTGTCAGCCAGGGTGATTTCAAACTCCGGGCCGACAAGGTGCGGATCAATGTCGTGCAGGGCAAGCCCAGCAGAATTGTCGCCGACGGCCATGTGGTGTTCGATTCGCCGTCGGGCGCCGCCCATGGCGACACCGGCGTTTACGAGGTGGGCCCGCGGCTCATCACGCTCAGCGGGCGCGTGCTTCTGACCAAGGACAAGAACGTCATGCGCGGCACGCAATTGACCGTCAATCTGGTGACGGGTGCCGCGCAATTGCGTGCGAAGGGCGAGCAGGGCGGGCGTGTTCAGGGGCTTTTCACGCCGCCGCCGCGTTCGGCGCCGCCTAAAAGTCAATCGAATCCGCAAACCAACCCGTAA
PROTEIN sequence
Length: 180
VNARRLPFLFAVAFALIPATGYAATAVNLGKHNADAPIQVSADSFIADINAKTGTYTGNVVVSQGDFKLRADKVRINVVQGKPSRIVADGHVVFDSPSGAAHGDTGVYEVGPRLITLSGRVLLTKDKNVMRGTQLTVNLVTGAAQLRAKGEQGGRVQGLFTPPPRSAPPKSQSNPQTNP*