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SCNpilot_cont_1000_p_scaffold_4568_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 8 / 38
Location: 272..1366

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPG1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 363.0
  • Bit_score: 320
  • Evalue 2.00e-84
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 363.0
  • Bit_score: 320
  • Evalue 6.40e-85
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS61794.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 363.0
  • Bit_score: 320
  • Evalue 2.80e-84

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAAAGCGTATTTTCAGTTCTGGCACCGCCTGAAGCCGCGCCACAAATGGGCGATTGGCATTGCGCTGGGCGTGACGGCGTGGATTGCCACGGGCCTGGTGTTCCAGCCCCACAGCCGGACCGACATTGCAGAGGCCAAGCCGAGCGAGACGCCACGGGTCAAGGTGCGCACGCTTTCCGCCTCGGACCGCAACGCCACCATTACGGTCCGTGGGCGTACGCAAGCCCTGCATGAAGTGGACGTGCGGGCCGAAGTCGAAGGGGTTGTCGAGGCCCTGCACTTCGAGAAGGGCGACCGGGTCAAAACCGGACAAGTACTTTGCCAAATCAAGCTGAACGACCGTGGCGCCCGCCTTCAGGAAGCCAAGGCGCTGAGCGCGCAGCGGCAAAAAGAATATGAAGTCGCCAAGAAACTGTTCGAGGACGGCTTCCGCTCCAAAACCCAGATGGCCCAGGCCGAAGCGGCCTTGCAGGCGGCACGCGCCGCCGAAGACACACAGGCGATCCAACTCGCCAACACGAAAATCCGCGCCCCGTTCGACGGCGTGACCGACGACCGCTATGTCAATGTGGGCGACTACATGCGGCCGGGCGACAAGTGCGCGCTTCTGATCGCGCCGGAGCCGTTCCTGGCGGTGGGCGCGCTGAACGAAAACAATGTCGGCCGCGTGCATGTGGGCGACAGCGCCACCGTCAATCTGGTGACCGGCGAAACCGTGAAGGGCAAGGTGCGCTTCGTGGCCGACCGGGCAGACGACGCCACGCGGGCCTTCCGCGTCGAGGTCGAACTGCCCAATCCGGACGCCAAGCTGCGCGAAGGTGTCAGCGCGGATATCCATATCCCCGTCACCCGGGTCAGCGCGCAAAAAATCTCCCCCGGCATTCTGGTACTGGACGATTCCGGCAAGATCGGCGTGCGCGTGGTGGAAAAAAATACGGTTCATTTCATGCCGGTGACGATCGTATCCGACGGGCCTGACGGCATGTGGATCACAGGCCTGCCCGACAAGGTGACCGTGATCACCGTGGGCCAGGAATTCGTCAGCGACGGCGAGCACGTGGAAGCGGTGCCCGACAAAGGCGGAGCAGCCTGA
PROTEIN sequence
Length: 365
MKAYFQFWHRLKPRHKWAIGIALGVTAWIATGLVFQPHSRTDIAEAKPSETPRVKVRTLSASDRNATITVRGRTQALHEVDVRAEVEGVVEALHFEKGDRVKTGQVLCQIKLNDRGARLQEAKALSAQRQKEYEVAKKLFEDGFRSKTQMAQAEAALQAARAAEDTQAIQLANTKIRAPFDGVTDDRYVNVGDYMRPGDKCALLIAPEPFLAVGALNENNVGRVHVGDSATVNLVTGETVKGKVRFVADRADDATRAFRVEVELPNPDAKLREGVSADIHIPVTRVSAQKISPGILVLDDSGKIGVRVVEKNTVHFMPVTIVSDGPDGMWITGLPDKVTVITVGQEFVSDGEHVEAVPDKGGAA*